Paenibacillus spongiae: L1F29_32590
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Entry
L1F29_32590 CDS
T09530
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn03022
Basal transcription factors
pspn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
L1F29_32590
09124 Replication and repair
03420 Nucleotide excision repair
L1F29_32590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspn03021
]
L1F29_32590
03036 Chromosome and associated proteins [BR:
pspn03036
]
L1F29_32590
03400 DNA repair and recombination proteins [BR:
pspn03400
]
L1F29_32590
Enzymes [BR:
pspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
L1F29_32590
Transcription machinery [BR:
pspn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
L1F29_32590
Chromosome and associated proteins [BR:
pspn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
L1F29_32590
DNA repair and recombination proteins [BR:
pspn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
L1F29_32590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
PhoH
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
UVI30064
LinkDB
All DBs
Position
complement(7279211..7281583)
Genome browser
AA seq
790 aa
AA seq
DB search
MFSHEGGGRGAKMVNTANTVQISVRALVEYVYRSGSIESGFCTAASLTDGTKAHQKIQKE
YGEKDRKEVYVKTEMPRGDLLFVVDGRCDGLLETDEGLTVDEIKSTSGSLEAIGEDGYPV
HWAQAICYAYMVAEEQGLPSMRIQLTYVQVNTEEQRRFVRGMTFGELAQFMEEMIRGYAP
YAELRQRHVIARDSSMRALAFPFDAYREGQRKLAGSVYKSIADKRKLFAKAPTGTGKTIS
TLFPAVKAMGEGLLQRLFYLTAKTITRTAAEEALTLMQAGGLHMHTVTITAKEKVCFQEE
MRCSKEFCEYADGYYDRVNAAMLDMLSQETAMTRQVVERYARKHKVCPFEFSLDAAYAAD
GIICDYNYIFDPRVSLKRLIEDQKRQTALLVDEAHNLVDRGREMYSAELNKADFLELQRT
FKTIRADVYEASKDVNQHLLRVRKAIGERKTLVELEAPGELIELVEFFVYTAEKVLAAGS
LGAEQGHAAALLLEGYFAASDFLRAAKLYDERYVTYTECFKSEVRIRMFCLDPSYLLSQM
GKGFRSHIFFSATLSPLSFYTEMLGGSKEDYAVAIPSPFSHEQLEVKIQPLSTRYQDRER
TKEPLARMIRQITEKQPGNYLVFFPSYAYMEDVYERFMTMDGGQTYADTLVQQTGMTEEE
RERFLAAFDAANARTLVGFAVMGGIFSEGIDLVGDRLNGVIVVGVGLPQLGLERNVIKDY
FERTGRNGYDYAYVFPGMNKVLQAGGRLIRSERDSGTLVLVDDRYLQPQYQRLLPEEWRS
YSVVNIESLY
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgttctctcatgagggcggcgggagaggcgcgaagatggtgaatacggcgaatacggtt
caaatttcggtaagggcgcttgtcgaatacgtgtaccggagcggtagcatcgaatccggg
ttctgcacggcggcatcgctgacggacggcacgaaggcccatcagaagatccagaaggag
tacggcgagaaggatcgcaaggaagtatatgtgaagacggagatgccccggggcgatctc
ctcttcgtcgtggatgggcgatgcgatggcctgctcgagacggacgaggggctcaccgtg
gacgagatcaaatccacgtcgggcagtctggaggccatcggcgaagacggatatccggtt
cattgggcgcaggcgatctgctatgcctacatggtagcggaggagcagggactccccagc
atgcgcatacagctgacctacgtgcaggtgaacaccgaggagcagcgccgtttcgtccgc
gggatgaccttcggggagctggcgcagtttatggaagagatgatccgcggttacgctccc
tacgccgagctgaggcaacggcatgtgatcgctcgcgattcgagcatgagggcattggcg
tttccgttcgacgcctatcgggaaggacagcggaagctggccgggtccgtctataagtcc
atcgcggacaagcgcaagctgttcgccaaggctccgaccggaacgggcaagacgatctcg
acgctgttcccggcggtcaaagcgatgggcgaaggactgctgcagcggctgttctatttg
acggccaagacgattacgcgaacagccgctgaggaagcgctgaccctgatgcaggcgggc
ggactgcatatgcataccgtgacgatcacggcgaaggagaaggtatgcttccaggaggag
atgcgctgctccaaggaattctgcgaatatgccgacggctactatgaccgggtgaatgcg
gcaatgctggacatgctgtcccaggagacggcgatgacccggcaggtggtggagcgttat
gcccgcaagcacaaggtgtgcccgttcgagttctcgctcgatgccgcttacgccgccgac
ggcatcatctgcgattataactatatcttcgatccgcgagtgagcctgaagcggctgatc
gaggaccagaagcggcagacggccttgctcgtcgacgaagcgcataatctggtggaccgg
ggcagggagatgtactccgccgagctgaacaaggcggatttcctggagctgcagcggacg
ttcaagacgatccgcgcggacgtgtacgaagcatccaaggatgtgaatcagcatctgctc
cgcgtccgcaaagccatcggggaacgaaagaccctcgttgaattggaagcgccgggcgag
ctgatcgagctggtcgaattcttcgtctatacggcggagaaggtgctcgccgcgggttct
ctgggcgcagagcaagggcatgcggcggcgctgctgctggagggctattttgccgcttca
gactttctgcgtgcggccaagctgtacgacgagcggtatgtcacctacacggaatgcttc
aagagcgaggtgcgcatccggatgttctgcctggatccgtcttacctgctcagtcagatg
ggcaaaggcttccgcagccatattttcttctccgccacactatctcccttgagcttctat
acggagatgctcggcggcagcaaggaggactatgcggttgcgatcccttcgccgttctcg
catgagcagctggaagtgaagattcagccgctgtccacacgctatcaggaccgcgaacgg
acgaaggagccgcttgcccgaatgatcagacagatcacggagaagcagccaggcaactac
ctggtgttcttcccttcctacgcctacatggaggatgtgtacgaacggttcatgacgatg
gacggcggccaaacatacgcggatacgctcgttcagcagaccggcatgacggaggaggag
cgcgaaaggtttctggcggcgttcgatgccgcgaatgcaagaacgctggtcggcttcgcc
gtcatgggcggtattttctcggaggggatcgatctggtgggggaccggttgaacggcgtc
attgtcgtcggcgtggggcttccgcagctcggcttggagcggaatgtcatcaaggattac
ttcgagcgtacaggcaggaacggctatgattatgcgtacgtctttcccggcatgaacaag
gtgctgcaggcgggagggcgcttgatccgctcggagcgggacagcggcacactcgtgctc
gtggacgaccggtacctgcagccgcagtaccaacggctgctgcccgaagagtggcggtcg
tactccgtcgtcaatatcgagagcctttattga
DBGET
integrated database retrieval system
