Paenibacillus spongiae: L1F29_33895
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Entry
L1F29_33895 CDS
T09530
Symbol
yycF
Name
(GenBank) response regulator YycF
KO
K07668
two-component system, OmpR family, response regulator VicR
Organism
pspn
Paenibacillus spongiae
Pathway
pspn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L1F29_33895 (yycF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pspn02022
]
L1F29_33895 (yycF)
Two-component system [BR:
pspn02022
]
OmpR family
VicK-VicR (cell wall metabolism)
L1F29_33895 (yycF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
UVI33850
LinkDB
All DBs
Position
complement(7581998..7582762)
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AA seq
254 aa
AA seq
DB search
MYGKILVVDDEQPIADILKFNLEKEGYQVICAFDGGEAVRLAFEEQPDLILLDLMLPVKD
GMDVCREVRSRLQTPIIMLTAKDTELDKVLGLELGADDYVTKPFSTRELLARVKAHLRRQ
KTEAAATAGAVNGSAGSGSGAAQQDMQGLRLFNLFIDTDMYVVYKDNEPLDLTHREYELV
YYLARNSGKVMTREHLLQAVWGFEYFGDVRTVDVTIRRLREKIEDDPSRPEYILTRRGLG
YMMRNPKSGGFGSG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgggaaaatattagtcgttgacgatgaacagccgattgcggacattctaaagttt
aatttggagaaggaaggctatcaggtgatctgcgctttcgacggcggagaagcggtccgt
cttgcattcgaagagcagcctgacctcatccttcttgatttgatgctgcccgtgaaggac
ggcatggacgtatgccgcgaggttcgctcacgtctgcagacgccgattattatgctgacg
gccaaagacaccgagctcgataaggtgcttgggctggagcttggcgccgatgattatgtg
acgaaaccgttcagcacgcgcgagctgctggcccgcgtgaaggctcacttgcgccggcag
aagacggaagcggcggcgaccgcaggcgcggttaacgggtcagccggctccggatcgggc
gctgcgcagcaggatatgcaggggctgcgcctgttcaatctcttcatcgatacggatatg
tacgtggtgtacaaggacaatgaaccgctggatttaacgcatcgcgagtatgagcttgta
tactacctggcccgcaattccggcaaggtgatgacgcgggagcatttgcttcaagcggta
tgggggtttgaatatttcggcgatgtgcggacggtggacgtgacgatccgcaggcttcgg
gagaagattgaggatgacccaagccggccggaatatattctgacgcgcagaggcctcggg
tatatgatgcgcaatccgaaatcgggcggcttcggctccggatga
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