Pseudoalteromonas spongiae: PSPO_a0048
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Entry
PSPO_a0048 CDS
T05098
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pspo
Pseudoalteromonas spongiae
Pathway
pspo00300
Lysine biosynthesis
pspo00470
D-Amino acid metabolism
pspo01100
Metabolic pathways
pspo01110
Biosynthesis of secondary metabolites
pspo01120
Microbial metabolism in diverse environments
pspo01230
Biosynthesis of amino acids
Module
pspo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSPO_a0048 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSPO_a0048 (dapF)
Enzymes [BR:
pspo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSPO_a0048 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
YNQ4_N
DUF1521
Draxin
Motif
Other DBs
NCBI-ProteinID:
ATC97315
LinkDB
All DBs
Position
I:complement(50610..51440)
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AA seq
276 aa
AA seq
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MLVNFSKMHGLGNDFMVIDNVTQNVFISKDQIRKLADRNFGIGFDQLLMVEAPYDPDLDF
HYRIFNADGYEVEQCGNGARCFARFVRMKGLTNRHRIQVSTKSGNITLHNEKDGKVRVNM
GHPKFDPAKVPFKATKRETTYIIREGEHTIFCGVVSMGNPHCVLEVDDINSDQITKLGPL
LESHERFPKKANIGFMQIISPEHIKLRVWERGAGETLACGSGACAAVVVGILQKKLANQV
KVELPGGELTINWQGDGHPVKMTGPAEHVFDGQIAI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctagtaaatttttctaaaatgcatggcttaggcaatgactttatggttattgataac
gtcacgcaaaatgtttttatttcaaaagaccaaattcgaaagttagcagatcgcaatttc
ggtattggatttgaccaattactaatggttgaagcgccgtacgatcctgatttggatttt
cattaccgaatttttaatgcggatggctatgaagttgaacaatgcgggaatggcgcgcgc
tgttttgctcgctttgtgcgtatgaaagggttaaccaaccgccatcgcatccaggtctca
acaaagtctggcaatattaccctacacaatgagaaagacggcaaagtgcgcgtaaatatg
ggccaccctaaattcgacccagcaaaagtgccgtttaaagcgaccaagcgcgaaacaacg
tatattatccgtgaaggcgaacatacaatattttgtggcgtcgtctctatgggcaacccg
cactgcgtacttgaagtagacgatatcaactcagatcaaattaccaagttaggcccgtta
cttgaaagccatgagcgctttcctaaaaaggccaacattggttttatgcaaataatctcg
ccagagcatatcaaactgcgcgtatgggaacgcggcgcaggtgaaacacttgcctgtggt
agtggtgcttgtgccgctgttgtggttggtattttacaaaagaaactcgccaatcaagta
aaggttgaattacctggtggcgaattaacaataaattggcaaggcgacggtcacccagta
aaaatgaccggccctgcagaacatgtgtttgatggtcaaatcgcgatatga
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