Pseudoalteromonas spongiae: PSPO_a0186
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Entry
PSPO_a0186 CDS
T05098
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pspo
Pseudoalteromonas spongiae
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspo03400
]
PSPO_a0186 (phrB)
Enzymes [BR:
pspo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PSPO_a0186 (phrB)
DNA repair and recombination proteins [BR:
pspo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PSPO_a0186 (phrB)
Prokaryotic type
PSPO_a0186 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ATC97436
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All DBs
Position
I:complement(183838..185241)
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AA seq
467 aa
AA seq
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MSTLYWIRRDFRLDDNPALFYALQQNCQHAVFITAYETWQAHNHSGIQIDFIERHLNWFS
DQLAKLGIKVSFIECDTFEQQIAQLTEFCQENDITSVVANSEPELREKIRDNKAAQQLEL
TLYDADTILPYGAVLNKQNEMFKVFTPYKKAWVKTLQQHGFNQNYLAAIKQSEESPNQAS
NITFNYAKQDSSKWPLAHEFMQHVLPRFLNDKVIDYARDRDFPAIKGTSGISPYLTIGAI
SPKRVLYDLLSYYPHILEDVKAPIFTWLNELIWREFYRNVLLSFPNLNKLHDFQGKFKGF
DWPNDHAKFTAWCEAKTGFPIVDAAMRQLKQTGWMHNRLRMIVASFLTKHLLVDWRLGEA
FFMQHLIDGDLAANSGGWQWAAGTGCDAQPYFRIFNPITQSEKFDPDGSFIRKYLPELEN
VPLKYIHQPQTYLNSVGNHSYWPQLVDLKEARLQALDYYQKELNNDE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagtactctttactggattagacgggattttcgtttagacgataatcccgctttattt
tatgcattacaacaaaattgccaacatgcagtttttattactgcctatgaaacttggcaa
gctcacaatcattcaggcattcaaattgattttattgagcgtcatttaaattggtttagc
gaccagcttgccaagctcggaattaaagtgagctttattgaatgcgatacctttgagcaa
caaattgcccaactaacagagttttgccaagaaaatgacattacttcggtggtagctaac
agcgaaccggaattacgtgaaaaaatacgtgacaacaaagctgcgcagcaactggagcta
acgctatacgatgctgacaccattttgccttatggcgcagtgcttaataaacaaaatgaa
atgttcaaagtttttacgccatacaaaaaagcatgggtaaaaacgctgcagcagcatggc
tttaaccaaaattatcttgcagcaattaaacaaagtgaagaaagccctaatcaagccagt
aacattacatttaattatgccaagcaagattcaagtaaatggcctttggcacacgagttt
atgcaacacgtgttacctcgctttttaaatgataaagttatcgactacgcgcgcgatcgg
gatttcccagcaattaaaggtacaagtggtatctcaccttacttaaccattggcgcaatt
agccctaaaagggttttatacgatctattatcctattacccgcacatacttgaagatgta
aaagcgcctatttttacttggctaaacgagctaatttggcgtgagttttatcgcaacgtg
ctgctgtcatttccaaatctaaacaaattgcacgactttcaaggcaaatttaaaggcttc
gactggccaaatgatcacgctaagtttaccgcttggtgtgaggcaaaaactggatttccg
atcgttgatgctgctatgcgccagttaaagcaaacaggttggatgcataaccgcctgcgt
atgattgtagcaagctttttaaccaaacatttattggttgattggcgcttaggtgaagct
ttttttatgcagcaccttattgatggcgaccttgccgccaatagcggtggctggcaatgg
gcagcaggcaccggctgcgatgcacaaccctatttcagaatttttaacccaataacgcaa
agtgaaaagtttgatcctgacggcagctttattcgtaagtatttaccagaacttgagaat
gtaccgcttaagtatattcatcaaccacaaacctatttaaattcggttggcaatcacagc
tactggccacaactggtagatttaaaagaagcccgcttacaggcacttgattattatcag
aaagagttaaataacgatgagtaa
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