Pseudoalteromonas spongiae: PSPO_a0239
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Entry
PSPO_a0239 CDS
T05098
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pspo
Pseudoalteromonas spongiae
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspo03016
]
PSPO_a0239 (trmA)
Enzymes [BR:
pspo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
PSPO_a0239 (trmA)
Transfer RNA biogenesis [BR:
pspo03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PSPO_a0239 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_4
Methyltransf_12
MTS
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_11
PrmA
DREV
Cons_hypoth95
Tudor_RapA
Motif
Other DBs
NCBI-ProteinID:
ATC97482
LinkDB
All DBs
Position
I:complement(228044..229141)
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AA seq
365 aa
AA seq
DB search
MPVIQIDTSQYDEQLAEKEQRISQQFAQFNAPKLEVFASEAKNYRQRAEFRVWHEGEDLF
HIMFDPETKEKIRVDQFDPAAPLICELMPRLLELLKPNEILRRKLFQIDYLSTLSGQILV
SLIYHKQLDDEWVNEANKLKALLKEEFDIDFIGRARKQKIVLGEEYVIEKLNVDNRELVY
QQVENSFTQPNAKLNEQMLEWAIDVSKPLNNDLLELYCGNGNFSIALAPSFNRVLATEIS
KSSVKSAQFNIAENKINNLDIIRMSSEEFTMAMNGEKEFSRLNGIDLKSYNCQSILVDPP
RAGLDKDTTDLVQGYDNIIYISCNPDTLERDLQQLTETHTIARFAIFDQFPYTHHIESGV
FLTRK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaattcaaatagatacttcacaatacgacgaacaacttgctgaaaaagaacaa
cgtatcagccaacaatttgcgcagtttaacgcgccaaaattagaagtatttgcgtctgaa
gcaaaaaattacagacaacgtgcagagtttcgcgtgtggcatgaaggtgaagatttattt
cacattatgtttgaccctgaaacaaaagagaaaatcagagttgatcagtttgatcctgca
gcaccattaatttgtgaattaatgcctcgtttgttagagctactaaaaccgaatgaaatt
ttacgtcgtaaactctttcaaattgattatttgtcgacattaagcggacaaattcttgtt
agcttgatttatcacaagcaacttgatgacgaatgggtaaacgaggctaataagctaaag
gcgttactaaaagaagagtttgatatcgattttattggccgagctcgcaagcaaaaaatt
gtgcttggtgaagaatatgtcattgaaaagctgaatgtagataatcgtgaacttgtttat
cagcaagttgaaaatagctttactcagccaaacgccaagctaaatgagcaaatgctcgag
tgggcaattgatgtctcaaaacctcttaataacgatctgctggaactttattgtggtaac
ggtaacttttcaattgcattagcgccaagctttaatcgcgtactagccaccgaaatttcc
aagtcttcggttaagtctgcgcaatttaatattgccgaaaacaaaatcaacaacctcgat
ataatccgtatgtcgagtgaagagttcactatggcaatgaatggtgaaaaagagttttcc
cgcttaaatggtatcgaccttaaaagttacaactgtcaaagtatattagttgatccgccc
cgtgcaggtttagacaaagacaccactgatttagtgcaagggtatgacaacattatctat
atttcatgtaatccagatacgctggaaagagatttgcagcaactaactgaaactcatacc
atcgcgcgttttgccatttttgatcagttcccgtatacccatcatatcgaatccggcgta
tttttaacgcgcaagtaa
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