Pseudoalteromonas spongiae: PSPO_a0793
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Entry
PSPO_a0793 CDS
T05098
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pspo
Pseudoalteromonas spongiae
Pathway
pspo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSPO_a0793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspo03400
]
PSPO_a0793
Enzymes [BR:
pspo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PSPO_a0793
DNA repair and recombination proteins [BR:
pspo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSPO_a0793
Prokaryotic type
PSPO_a0793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATC97966
LinkDB
All DBs
Position
I:757689..758360
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AA seq
223 aa
AA seq
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MTTWTDVLAVEKQQDYFKDTLDYVAKRRAEGVNVFPPADEVFSAFSITAFDDVKVVILGQ
DPYHGPNQAHGLAFSVKPGIKAPPSLANMYKELATDIDGFTIPNHGYLQAWAEQGVLLLN
TVLTVEQGQAHSHKKLGWETFTDRVIAALNEHGDGIVFLLWGSHAQKKGRHIDTTKHVVF
NGPHPSPLSAYRGFFGCKHFSKANDALITMGKTPINWLLPKEV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgactacttggacagatgtactcgccgttgaaaagcaacaagactactttaaagacaca
ctcgactatgttgcgaaaaggcgcgcagagggagttaatgtatttccgcctgcggatgag
gtgtttagtgcgttttcaatcaccgcgtttgatgatgtgaaagtggtgatcctcgggcag
gacccttatcatggtccaaatcaagcacatggcttggcgttttcagtaaaaccgggtatt
aaagcgcctccatctttggccaacatgtataaagaattagcaactgatatcgacggtttt
actatacccaatcatggttatttgcaggcgtgggcagagcagggagtgctattactcaat
acggtattaaccgttgagcaaggccaagcccactcgcataaaaaactcggttgggaaacg
ttcaccgaccgtgttatagctgcattaaatgaacatggtgatggtatagtgtttttactt
tggggttcgcatgcgcaaaaaaaaggacgtcatatcgatactactaagcatgttgttttc
aatgggccgcatccgtcaccgctttctgcctatcgcggcttttttggttgtaagcatttc
tctaaagcaaatgatgctttaattacgatgggtaaaactccaattaattggctgttacca
aaagaggtttaa
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