Pseudoalteromonas spongiae: PSPO_a0999
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Entry
PSPO_a0999 CDS
T05098
Symbol
clpB
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pspo
Pseudoalteromonas spongiae
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pspo03110
]
PSPO_a0999 (clpB)
Chaperones and folding catalysts [BR:
pspo03110
]
Heat shock proteins
HSP100
PSPO_a0999 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_14
IstB_IS21
AAA_24
nSTAND3
RuvB_N
TniB
AAA_18
ATPase_2
Mg_chelatase
bpMoxR
AAA_7
Zeta_toxin
NBD_SMAX1
NACHT
AAA_25
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
ATC98140
LinkDB
All DBs
Position
I:929751..932327
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AA seq
858 aa
AA seq
DB search
MRLDRFTSKFQAALADAQSLALGRDHQFIEPIHLMYSLLTQTGSSVRALLAQAGVNADEM
MTKVSAEIDKLFKVDGVGGDVQLSHNMANLLNLCDKYAQKRKDSYISSEIFILVACEDKG
PLGTLFKQFGLTQNKIETAISAIRGGQKVDSPNAEDTRQALEKFTVDLTERAELGKLDPV
IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSL
DMGALVAGAKYRGEFEERLKSVLNELAKEEGQVILFIDEIHTMVGAGKSDGAMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELH
HTVEITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAGSHIRMQIDSKPEELDRLERKII
QLKLEDNALAKETDDASKSRQADIQAQIKQLDSQYNELDEVWNAEKASLQGTQVIKTELE
QARLDLEVARRAGDLQRMSELQYGRIPELERKLDLASQAEMQDMSLLVNKVGENEIAEIL
SRWTGIPVAKMLQGERDKLLSMEAKLHEKVVGQDEAVVAVSNAIRRSRAGLADPNRPIGS
FLFLGPTGVGKTELTKALANFMFDTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTIDFKNTVIIMTSNL
GSDVIQEQASNNDYQGLKNTLMSVIGQHFRPEFINRIDETVVFHPLAQAHIENIAKIQLQ
RLEQRLQDNGYQLELTDAALAKIAEAGFDPVFGARPLKRAIQQTIENPLAQTLLSGEFKA
GSCFVVDCHDGEIAIASK
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcgattagatcgttttactagcaaatttcaagctgcacttgctgatgcgcaatcattg
gcactaggccgcgaccatcagtttattgagccaattcatttaatgtatagcttgcttacg
caaaccggttcaagcgtacgagcattgttggcacaagcaggtgttaatgccgatgaaatg
atgaccaaagtgtctgcggaaatcgacaagttatttaaagttgacggtgtgggcggtgat
gttcagttgtcacataatatggctaacttgctgaacttatgtgataagtacgcacaaaaa
cgcaaagactcctatatttctagcgagatcttcattttagttgcctgtgaagataaaggg
ccgctgggcactttatttaagcaatttggtttaacgcaaaacaagattgaaaccgcaata
agcgcgattcgtggtggccaaaaagttgatagcccaaatgccgaagatacccgccaagcg
cttgagaaatttaccgtagatttaactgaacgcgccgagttaggtaaacttgatcctgta
ataggtcgcgatgaagaaattcgccgtacgattcaagtattacagcgccgtactaaaaat
aaccccgtactcattggtgaaccaggggtgggtaaaacggcgattgcggaagggctcgca
caacgtattattaatggtgaagtgcctgaagggctgaaaaataagcgtgtattatcactc
gatatgggcgcgcttgtagccggtgcaaagtaccgcggtgaatttgaagaacgtctcaag
tcagttctcaacgaacttgccaaagaagaagggcaggttattctatttattgacgaaatc
catactatggtgggagctggtaaaagtgatggtgcaatggatgccggtaatatgcttaag
cctgcgcttgctcgtggtgagcttcattgtgtcggtgcgacaacacttgatgagtatcgt
cagtacattgaaaaagatgcagcgttggaacgccgcttccaaaaagtattggttgaagaa
ccaagcgtagaagacaccatagcgattttacgtggattaaaagagcgctacgaactgcat
catacggtagaaatcactgaccctgcgattgttgctgcggcaacactttctcatcgttat
atcagcgaccgtcaattgccagataaagcgatagatttgattgatgaagcgggttcacat
atccgcatgcaaattgactcaaaacctgaagagttagatcgattagagcgaaaaattatt
cagttaaagcttgaagataacgcgttagcaaaagagactgacgacgcatcaaagtcgcgt
caggcagatattcaggcacagatcaaacaacttgatagccagtacaatgaattagatgaa
gtgtggaatgcggaaaaagcatcgctgcagggcacgcaagtaatcaaaactgagttagaa
caagcgcgattagatttagaagtggcaagacgtgctggcgatttacagcgcatgagtgaa
ttgcaatatggtcgtatccctgagttagagcgcaaacttgatttagcttcgcaagccgaa
atgcaggatatgagcttactcgttaacaaagttggtgaaaacgaaattgctgagatcctc
tctcgttggactggtattccggtagcgaaaatgctgcaaggtgaacgcgataaactactt
tcaatggaagcaaaactgcacgagaaagtagtggggcaagatgaagctgtggtggcggtg
tcaaatgcgatacgtcgctcgcgcgcaggcttggcagaccccaatcgtccaattggctcg
tttttattcttaggcccaacaggggttggtaaaaccgagctgacgaaagcgcttgccaac
tttatgttcgatacagaagaagctatggtgcgcattgatatgtctgagtttatggaaaaa
cactcagtcgcgcgcttggtaggagcacctccaggttatgtgggctatgaagaaggtggc
tatctaaccgaagcggttcgtcgtaagccgtattcagttgtattgcttgatgaagttgaa
aaagcgcatcctgatgttttcaatatcttgctgcaagtgcttgatgatggtcgtttaact
gatgggcaagggcgcactatcgacttcaagaatacggtgattattatgacctccaactta
ggttcagatgtgatccaagagcaagcaagtaataacgattaccaaggacttaaaaacact
ttgatgtcggtgattggtcagcactttaggcctgaatttattaaccgtattgatgaaaca
gtggtattccatccgttagcacaagcgcacattgaaaatattgcgaagatccaattgcaa
cgccttgaacaacgtttgcaagataatggatatcagcttgaacttacggatgcggcgctg
gctaaaattgcagaagcgggctttgatccagtgtttggcgcacgtccattaaaacgtgcc
attcagcaaaccattgaaaatccattagcacaaacgctgttatcgggtgagttcaaagcg
ggaagttgttttgttgttgattgtcatgacggtgaaatagccattgcttcaaagtaa
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