Pseudoalteromonas spongiae: PSPO_a1560
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Entry
PSPO_a1560 CDS
T05098
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pspo
Pseudoalteromonas spongiae
Pathway
pspo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSPO_a1560 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspo01007
]
PSPO_a1560 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspo03016
]
PSPO_a1560 (serS)
Enzymes [BR:
pspo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
PSPO_a1560 (serS)
Amino acid related enzymes [BR:
pspo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PSPO_a1560 (serS)
Transfer RNA biogenesis [BR:
pspo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PSPO_a1560 (serS)
Prokaryotic type
PSPO_a1560 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
ATC98620
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All DBs
Position
I:1459834..1461126
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AA seq
430 aa
AA seq
DB search
MLDPRFLRQDIEEAAERLKGRGFELNVAEIQALEEKRKALQVKTQELQNERNTRSKAIGQ
AKAKGEDIAPLLAAVGSLGDELDAAKKEQDEILAELNAIAATIPNLPDSEVPFGNDEDDN
VEVVKWGEPKQYDFEVKDHVDLGEGLAKGLDFEAGVKLSGARFTVMRGKVARMHRALVQF
MLDTHTDTNGYTEMYVPYLVNKDSLYGTGQLPKFAEDLFHTEAISEHNEGFSLIPTAEVP
LTNLGRDVIFDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDS
MQALEDLTNHAEGILQALELPYRKVILCTGDMGFGASKTYDLEVWLPAQDTYREISSCSN
MQDFQARRMQARFRRQGEKKPELLHTLNGSGLAVGRTLVAILENYQQADGSVVVPEVLRP
YMGGLEVITA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgttagacccacgatttttacgtcaggatatcgaagaagccgcagagcgcctaaaaggc
cgaggttttgaattaaacgtagcagaaattcaagcgcttgaagaaaagcgtaaagcgcta
caagttaaaacacaagaattacaaaatgagcgtaacacacgctccaaagcaattggtcaa
gcaaaagcaaaaggtgaagacattgcacctctgttggctgctgtaggttccttaggtgat
gagttggatgctgctaaaaaagaacaagacgaaatccttgctgaattaaatgccattgct
gcaacgatccctaacttaccagatagcgaagtaccatttggtaacgacgaagacgataac
gttgaagtggttaaatggggcgagccaaaacaatatgactttgaagtaaaagatcacgtt
gatttaggtgaaggtttagcaaaaggcttagattttgaagcgggcgttaaactttcaggc
gcacgctttactgtaatgcgcggcaaagtggcgcgtatgcaccgtgcccttgtgcaattt
atgcttgatacgcacacagacacaaacggttataccgaaatgtatgtaccgtatttagta
aacaaagacagcttgtacggcacaggtcagttacctaagttcgcagaagatttattccac
acagaagcaatcagcgagcataatgaagggtttagcctaattccaacggcagaagtacca
ttaactaaccttggccgcgatgttatttttgatgaagctgaattaccattaaaaatgact
gcacatacaccgtgtttccgcagtgaagcaggtagctatggccgtgacacacgtggtctt
attcgtcagcaccagttcgacaaagttgaattagtacagctagtaaagcctgaagactca
atgcaagcgttagaagatctgactaaccacgccgaaggtattttacaagcacttgaacta
ccgtaccgtaaagtaattttatgtactggtgatatgggctttggcgcaagcaaaacatac
gacttagaagtatggctgccagcgcaagacacttaccgtgaaatttcaagctgctcaaat
atgcaagatttccaagcacgccgtatgcaagcacgttttcgtcgtcaaggtgagaaaaag
cctgagttactgcacacactaaatggttctggtttagcggttggtcgtacacttgtagcg
attctagagaactatcagcaagcagatggctcggtagtggtaccagaagtacttcgtcca
tacatgggcggcttagaagttattactgcataa
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