Pseudoalteromonas spongiae: PSPO_a1952
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Entry
PSPO_a1952 CDS
T05098
Symbol
rlmI
Name
(GenBank) 23S rRNA (cytosine1962-C5)-methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
pspo
Pseudoalteromonas spongiae
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspo03009
]
PSPO_a1952 (rlmI)
Enzymes [BR:
pspo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
PSPO_a1952 (rlmI)
Ribosome biogenesis [BR:
pspo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSPO_a1952 (rlmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
Cons_hypoth95
Methyltransf_31
PrmA
TRM5-TYW2_MTfase
UPF0020
Methyltransf_15
Methyltransf_16
Motif
Other DBs
NCBI-ProteinID:
ATC98971
LinkDB
All DBs
Position
I:complement(1843301..1844224)
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AA seq
307 aa
AA seq
DB search
MPNIDLTNLLSAIAKGAPFNDEVCRVYHGRGDSQGETNFINLDWYPPYLFLACYNIIDET
TQNALTEAVWQAQQAAGFNAKGLVFQYRAGRDTQVSVPFGEVQDRFEVAELGAKYWVQLT
KTQNTGIFPDMREGRAFVKNNSHDAKVLNLFSYTCAFSVVAKLGGAQQVINMDMNKSVLR
TGADNHRLNKVAENISYLPHDILKSFGKLKKAAPFDLIVVDPPSFQKGSFVLTKDYQKIL
RRLPDLCHSNTQLLLCANSPDVSENLFIEMISDATEGRLSFVERLPAAPSFEEPDGANLK
ALVYRLA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatatcgatttaaccaatttactaagcgctattgccaaaggcgcaccgtttaac
gatgaagtgtgccgtgtttaccatggccgcggtgatagccaaggtgaaactaatttcatc
aatttagattggtacccgccgtatttatttcttgcgtgctacaacataattgatgaaaca
acgcaaaacgctctaacagaagccgtttggcaagcgcagcaagctgctggatttaacgca
aaagggcttgtgtttcagtatcgtgccggacgtgatacgcaagtgtctgtaccgtttggt
gaggtgcaagaccgattcgaagttgctgaacttggcgccaaatattgggtacaactaacc
aaaacgcaaaatacgggtatttttcctgatatgcgtgagggcagggcgtttgttaaaaat
aatagtcacgatgcaaaagtacttaacttattttcatatacctgtgcgttttcggttgtc
gctaaattaggtggcgctcaacaagttattaatatggatatgaataaatcagtgttgcgt
acgggggctgataatcatcgattaaataaggtggcggaaaatattagttatttacctcac
gatattttgaagtcatttggtaaattaaaaaaggccgcgccatttgatttaattgtggtt
gatccgccgagttttcaaaaaggcagtttcgtactaaccaaagattatcaaaaaatttta
cgccgtttgccggatttatgccacagcaatacgcagctattgttatgtgctaacagccct
gatgtctcagaaaacctgtttatcgagatgataagtgacgccaccgaagggcgactgagc
tttgttgaaagactaccagcggctccgagttttgaagagccagatggcgcaaatttaaaa
gcgctggtttatcgtctagcgtaa
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