Pseudoalteromonas spongiae: PSPO_a2001
Help
Entry
PSPO_a2001 CDS
T05098
Symbol
truB
Name
(GenBank) tRNA pseudouridine55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pspo
Pseudoalteromonas spongiae
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspo03016
]
PSPO_a2001 (truB)
Enzymes [BR:
pspo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSPO_a2001 (truB)
Transfer RNA biogenesis [BR:
pspo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSPO_a2001 (truB)
Prokaryotic type
PSPO_a2001 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ATC99016
LinkDB
All DBs
Position
I:complement(1898244..1899182)
Genome browser
AA seq
312 aa
AA seq
DB search
MGRRQKGRAIDGILLLNKPTGISSSKALQIAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFSQFLLDTDKTYVVRAKLGERTDTSDSDGEIVETKPVNITKQQLVDAVKSFEGESDQ
YPSMYSALKYEGKPLYYYARQGIEVPRKCRKINVFSLTLDEVDFDNNEIQMTAHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRSAVGHYPAEQMMTLDELQAILDDAKANDITPSEKLDP
LLLPMDTALYGMTEVLVTDGQAKAFSHGQAATMPNLPDGEFKVIRQSDNRFMGIGERNSD
GQLKSKRGLSNA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtaggcaaaaaggtcgtgcaattgacggcattttactgttaaacaaaccaact
ggcatctcatcaagtaaagcactgcaaattgctaagggcatttactttgcgcaaaaagca
ggacataccggtgcacttgatccactggcaacaggcatgttgccaatttgttttggtgaa
gcgaccaagttttcgcagtttttgttagatactgataaaacctatgtggtgcgtgctaag
ttgggcgaacgcactgacacctcagattcagatggcgaaattgttgaaactaagccagtt
aatatcactaagcagcagttagttgatgcagtgaaatcatttgaaggcgaatcggaccaa
tacccatcgatgtactcggcgctgaaatatgaaggcaaacctttatattactatgcaaga
caaggcatcgaagtgccacgtaagtgccgtaaaatcaatgtgtttagtttaaccctagac
gaagttgattttgacaataacgaaattcaaatgaccgcgcatgtgagtaaaggcacttac
attcgcactattgttgacgatttaggtgaaaagctaggctgtggcgcacacgttattatg
ctgcatcgcagtgcagtgggtcattatccggctgaacaaatgatgacgcttgacgaatta
caagcgattcttgatgacgcaaaagcaaacgacatcacaccgagcgaaaagcttgatcca
ttattattgccaatggataccgcattatatggtatgacagaagtgttggtaaccgatggg
caggcgaaagcgtttagtcatggtcaggcggcaactatgccaaacctacccgacggtgag
tttaaagttatccgtcaaagcgataaccgctttatgggcattggtgagcgcaatagtgac
ggccaacttaaatctaagcgtggattatctaacgcttag
DBGET
integrated database retrieval system
