Pseudoalteromonas spongiae: PSPO_a2040
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Entry
PSPO_a2040 CDS
T05098
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pspo
Pseudoalteromonas spongiae
Pathway
pspo03030
DNA replication
pspo03430
Mismatch repair
pspo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSPO_a2040 (dnaX)
03430 Mismatch repair
PSPO_a2040 (dnaX)
03440 Homologous recombination
PSPO_a2040 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspo03032
]
PSPO_a2040 (dnaX)
03400 DNA repair and recombination proteins [BR:
pspo03400
]
PSPO_a2040 (dnaX)
Enzymes [BR:
pspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSPO_a2040 (dnaX)
DNA replication proteins [BR:
pspo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSPO_a2040 (dnaX)
DNA repair and recombination proteins [BR:
pspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSPO_a2040 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_14
AAA_5
PIF1
AAA_18
AAA_16
AAA_7
TIP49
nSTAND3
TsaE
AAA_19
AAA_assoc_2
Rad17
Mg_chelatase
AAA_2
AAA_24
SKI
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ATC99043
LinkDB
All DBs
Position
I:complement(1936622..1938907)
Genome browser
AA seq
761 aa
AA seq
DB search
MSYQVLARKWRPQNFHQLVGQQHVKQALVNALDQNRLHHAYLFTGTRGVGKTTIARIFAK
SLNCESGITSQPCGSCNACVDIEQGRFIDLIEIDAASRTKVEDTREILDNVQYAPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLAALSE
NEIETQLTHILQQEQLGFEPEALKQLAQSAKGSMRDALSLTDQAIAQTNGNISHQATKQM
LGLMDITWAQSLLIAAMASDGDSLLELSAKLGLQNGNYGAVLDDLIKLCHLILVSKLVPS
AAQLSDQYADFISELANEADTREIQVYYQLLLNGKKDLMLAPTEQLGFEMVMLKLLAFEP
AQMQAQQNQSAQTQPQAQQATPSARVSLKEQLKKQKEALDNKQVTQPQPEPVQPVVEKPA
PLAPATEAPAPQQQIAPVQSQEQHSQEQPSQEQLEQQVNQQMDDVLAQAEQLTSQSQAPE
MFESQQQQQQQQQQQQQQQQQQQFDSAPEPQQMPEQVVNEQPPVEESSQPSFEQNFNNEA
EAIAKILARRNVSGSGSLIQPDGSETSIKKTEPQQRGENGAKPKQSPLEKYRGETQHVAP
ELIEQLTPEPKQEEAPAPEPQVIEGFESPISQERFAHQQDDWANKIETMGLGGRVRQFAL
HSIYQQNGAEVSLLVDSEQRHLDSPMLREQLQQALSNLLNTHVELIINFNDVVEQTPFKI
QQKIDAFRHQQAVHTIKNDPIITQLMTHFDAELDEGTIKAL
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagttctggcaagaaagtggcgtccacaaaactttcatcagttagttggg
cagcaacacgttaaacaagcattagtaaacgcgcttgatcaaaaccgtttgcaccatgct
tacttatttaccggtacacgtggtgtaggtaaaaccactattgccagaatttttgcaaaa
agcttaaactgcgaatcaggcattacaagtcagccttgtggcagctgtaatgcctgtgtt
gatatcgagcagggccgttttatcgacctaattgaaatcgatgcagcgtcgcgtaccaaa
gtagaagatacgcgcgaaattctcgataacgtgcaatacgcgcctacgcgtggccgttat
aaagtgtaccttatcgatgaagtgcacatgctctctaaacatagctttaatgcgctatta
aaaacactagaagagccaccagagcacgttaaatttttactagctacgaccgatccgcaa
aaattacccgtcactattttatcgcgttgtttgcaatttaatttggccgcattgtcagaa
aatgaaattgaaacacaactaacgcatattttgcagcaagagcaactgggttttgaacca
gaagcgcttaagcaattggcacaaagtgccaaaggcagtatgcgcgatgcactgagttta
actgaccaagccatcgctcaaactaacggtaatattagccatcaagcaaccaaacaaatg
cttggtttaatggatattacttgggcacaaagtttattgattgcggccatggccagcgat
ggtgatagcttattagagttaagcgcgaaattgggcttacaaaatggcaactatggtgcg
gtacttgatgacttaattaagctatgtcatttaatactcgtgtctaagttggtgccaagt
gctgcacaactgagcgaccaatatgctgattttattagtgaactggcaaatgaagcagat
acccgtgaaatacaggtgtattaccagttactgttaaacggtaaaaaagatttaatgctt
gcgccaaccgagcaacttggctttgaaatggtgatgttaaagttactggcgtttgaacct
gcacaaatgcaggcgcagcaaaaccaatcagcgcaaacacagccacaagctcaacaagca
acgccaagcgcgcgtgtttcgctaaaagaacaattaaaaaaacaaaaagaagcactcgat
aataaacaggtaacgcagccacaacctgagcctgtacaacctgtagttgaaaaaccagca
ccgcttgctcctgcaacagaagctcctgcgccgcaacagcaaatagcaccagtgcaatct
caggaacaacattcgcaagagcaaccatctcaagaacaattagagcagcaagtaaatcag
caaatggatgacgtacttgcacaagctgagcagttgacgtcacaatcgcaagcgcctgaa
atgtttgagtcacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaa
cagcaacagttcgatagtgcaccagagccacagcaaatgcctgagcaggtggtaaatgaa
cagccaccagtagaagaatcgtctcagccaagctttgagcaaaattttaataacgaagcc
gaagccattgctaaaattttagcgcgacgcaatgtatctggttctggttcacttattcaa
ccagatggtagcgaaacatcgataaaaaagactgagccccagcaaaggggcgaaaatggt
gcaaaaccaaaacaaagcccacttgaaaaataccgcggagaaactcagcatgtggcacct
gagttaattgaacaattaacgccagagccaaagcaagaggaagcacctgccccagagccg
caagttatcgaaggctttgaaagcccaatttcacaagagcgtttcgctcatcagcaagac
gattgggcaaataaaattgaaactatgggactcggtggtcgcgtacgtcaatttgctctg
cacagtatttatcagcaaaatggggctgaagtgagcttactggttgacagtgaacagcga
cacctcgactcacccatgctgcgtgaacagttgcaacaagcactgtcaaatttactaaat
acgcacgttgaattaattattaattttaacgatgtggtagaacaaacaccgtttaaaatt
cagcaaaagattgatgcatttcgtcatcaacaagcggtgcacaccattaaaaacgaccca
attatcactcagctcatgacacactttgacgcagagctagatgaaggtacaataaaggca
ttataa
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