Pseudoalteromonas spongiae: PSPO_a2162
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Entry
PSPO_a2162 CDS
T05098
Symbol
truA
Name
(GenBank) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pspo
Pseudoalteromonas spongiae
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspo03016
]
PSPO_a2162 (truA)
Enzymes [BR:
pspo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PSPO_a2162 (truA)
Transfer RNA biogenesis [BR:
pspo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSPO_a2162 (truA)
Prokaryotic type
PSPO_a2162 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Mucin2_WxxW
Motif
Other DBs
NCBI-ProteinID:
ATC99151
LinkDB
All DBs
Position
I:complement(2058805..2059596)
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AA seq
263 aa
AA seq
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MRVALGVEYDGSQYSGWQRQQHVNSVQEELENALSKICNEKIEVTCAGRTDAGVHGTGQV
VHFDTTADRAMVAFTLGVNANLPDAIAIRWAKQVSEDFHARYSATARRYRYIIYNSTYRP
GILRSGLSHYHHPLDVKQMQLAAPYLLGEQDFTSVRAVHCQSKTPFRNIMHLNVERYNDF
IVIDIKANAFVHHMVRNIAGCLIDIGQGKYPPEWMQQVLALKDRTQASATAKPGGLYLVE
VDYPEHFEIPKSDPGPLFLPNSL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtcgctctaggcgtagaatatgatggttctcagtacagtggttggcagcgccaa
caacacgtaaacagtgtacaagaagagctcgaaaacgcgctttcaaagatctgtaacgaa
aaaatagaagtgacttgtgcgggtagaaccgatgctggtgtacatggaacagggcaggta
gtgcattttgacaccaccgctgatagagccatggtggcgtttacgctcggtgtgaatgcc
aacttaccggatgccattgcaattcgctgggcaaaacaagtaagtgaagactttcatgcg
cgttatagcgcaacagcaagacgctatcgctacattatatataacagtacttatcgacca
ggcattttacgttcgggtcttagtcattatcaccacccacttgatgtaaaacaaatgcag
ttagctgcgccttatttgttgggcgagcaagactttacatcggtgcgcgctgtgcattgt
caatcaaaaacgccatttcgaaacattatgcatctaaatgttgaacgttataacgacttt
attgtgattgatattaaagccaacgcgtttgttcaccacatggtacgaaatattgccgga
tgtttaattgatattggccaaggcaagtacccaccagagtggatgcaacaagtattagcg
cttaaagatcgcacccaggcatctgcaacggcaaagcctggtgggttatatttagtggaa
gtggattatcctgaacattttgaaatacctaaatcggatccagggccgctatttttacca
aatagcttataa
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