Pseudoalteromonas spongiae: PSPO_a2478
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Entry
PSPO_a2478 CDS
T05098
Symbol
sms
Name
(GenBank) DNA repair protein RadA / Sms
KO
K04485
DNA repair protein RadA/Sms
Organism
pspo
Pseudoalteromonas spongiae
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspo03400
]
PSPO_a2478 (sms)
DNA repair and recombination proteins [BR:
pspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSPO_a2478 (sms)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
SLFN-g3_helicase
Rad51
RecA
AAA_14
GvpD_P-loop
Viral_helicase1
ABC_tran
NTPase_1
AAA_24
T2SSE
AAA_30
AAA_16
AAA
Zeta_toxin
AAA_29
KdpD
DUF7125
DUF6549
nSTAND3
zf-C2H2_6
AAA_33
cobW
AAA_5
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ATC99414
LinkDB
All DBs
Position
I:complement(2371337..2372710)
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AA seq
457 aa
AA seq
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MAKNKTAFVCSECGAEFARWQGQCGECKAWNTVTEFRVPSIKQTPRSGGATAGYAGAIEA
KVQTLDEVNLEQLPRFTTGFAEFDRVLGGGVVPGSAILIGGSPGAGKSTLLLQTMCLLAQ
NMNTLYVTGEESLQQVAMRAKRLGLPTDKLKTLAETNVETICQLALREKPQIMVIDSIQV
MHMADIQSAPGSVSQVREGAAYLTRFAKQNQVAIIMVGHVTKDGSLAGPKVLEHCIDCSI
LLEGSSDSRFRTLRGNKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLNRSDEQTPGSLVM
VIWEGTRPLLVEVQALVDYSQLGNPRRVTVGLEQNRLAMLLAVLHRHGGLQVSDQDVFVN
VVGGVKVTETSADLALITALVSSFKNASLARELVVFGEVGLGGEIRPVPSGVERLKEAAK
HGFKRAIVPIANKPKEQIEGMEVIGVSSLSQALEALF
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaataaaactgcatttgtttgcagtgagtgtggcgcagaattcgcccgttgg
caaggtcaatgtggtgaatgtaaagcgtggaatacggtgactgaatttcgtgtgccatca
attaagcaaacaccaagaagtggtggcgcaacagccggttatgcgggcgcgattgaagct
aaggtgcaaaccttagatgaggttaatcttgaacaattgccacgttttacaacaggcttt
gctgaatttgaccgcgtactgggtggcggtgtggtgccgggtagtgcaattttaattggt
ggttctccaggtgcaggtaaaagtaccttactgctacaaaccatgtgtttgctcgcacaa
aatatgaataccttgtacgttactggtgaggaatcgctgcagcaggtggcaatgcgagcg
aaacgccttggtttacccaccgataaactgaaaaccctcgctgaaaccaatgtagaaacg
atttgccaattagcgcttagagaaaagccgcaaattatggttattgactcaattcaggta
atgcatatggccgatattcagtcggcgccgggcagtgtatcgcaagttcgagaaggtgct
gcttatttgacgcgttttgccaagcaaaaccaagtggcgattattatggttggccatgtt
actaaggatggttctttggctggtccgaaagtgctagagcattgtattgactgttctatt
ttacttgaaggtagcagcgatagccgctttagaacgctgcgtggcaacaaaaaccgtttt
ggagcggtaaatgagttaggcgtatttgccatgacagggcaaggcttaaaagaagtcagt
aacccatcggctattttcttaaatcgttcagacgagcaaacaccaggttcgctagttatg
gtgatttgggaaggcacacgaccactgctggttgaggtgcaagcattggtagattattcg
cagcttggtaacccaaggcgcgttactgtgggccttgaacagaaccgcttggcaatgtta
ctagcggtattgcaccgtcatggtggcctgcaagtatctgatcaagatgtatttgtaaat
gtggtgggtggtgtaaaggttactgaaaccagcgccgacttagccctcattacagcgctt
gtttcaagttttaaaaatgcctcactggcacgcgaattagtggtatttggtgaagtaggc
ctaggcggtgaaattcgtcctgtgccaagtggtgttgaacgattaaaagaagcggcaaag
catggctttaaacgcgctattgtgccgatagctaataaaccaaaagagcaaattgaaggt
atggaagtgataggggtgagttcgctgtcacaagcgttggaagcgctgttttaa
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