Pseudoalteromonas spongiae: PSPO_a2680 Help Entry PSPO_a2680        CDS       T05098                                  Name (GenBank) hypothetical protein   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism pspo  Pseudoalteromonas spongiae Brite KEGG Orthology (KO) [BR:pspo00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pspo03400]     PSPO_a2680 Enzymes [BR:pspo01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      PSPO_a2680     5.6.2.6  RNA 3'-5' helicase      PSPO_a2680 DNA repair and recombination proteins [BR:pspo03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     PSPO_a2680 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C Cas3-like_C_2 T4SS-DNA_transf Ribosomal_S27e Motif Other DBs NCBI-ProteinID:  ATC99589 LinkDB All DBs Position I:complement(2563245..2567699) Genome browser AA seq 1484 aa AA seqDB search MDTQKLIEALDRLENKETELLAWGDIDVSSSEAEIRDSIRESGVNDIFVDEYFDALKSRC FIFEVEAGKYRSRMAETVRLQVLSRQWFRSKGAEDTKPLISDFRFLKRARQYPKRDKHAK TLIDNWEQNRLFSSAEEKVILSNLLKNGDDWFKLSGFQVRSTERILEKFDKHKYKSAKDA SATIVCAGTGSGKTLSFYLPAMTKLAASLLQDAQPRVRILAIYPRKELLKDQFAETYKEA RKLDDYLLSKGRRKISIGTFYGDTFFENYTKDGAAFEAMVCPQKPNGKHCGGTLNFSKAT KQVICRSCSAVLPEDEILATRERVKKSPPDILFTTTEMLNQRLSDGYSNHLFGVTRDQKS IPLVLLDEVHTYEGSTGAQTSYLLKRWMKFSGIKPHFVGLSATLADAKNFFADLTGTKSH FTELVESFEHELEEEGAEYMLALRGDPASQTGLLSATIQATMLGSRMLDTHQGVGKNISQ GIFGQKAFVFTDDLDVINRLYNDYLDSEGKKDFYGEIRPRDGDDSPLAWLRSSHHPNYDQ ERQKVLGLDWSSAEEIGHNLSESTQVERTSSQDSGVNQTANVVVATASLEVGYNDPDVGL VIQHKAPRNVASYLQRKGRAGRRRGMRPWMYTILSDFGRDRIAFQQYEQLIDPKVKTTKL PIENSHIHKMHAALATLEWLVKEYRMDWVNVWAVLREPNRADKEGKLTNGKSLQQIKDAV TDVMASQAKTRQLTDYLQDTLTLSDDQVKVVMWAPPRSIMMSFLPELRQNLQFKWGAKGK RWDSLVEQQSGPMPKYISSQLFSALDTQALTIALDRSTKKELRTNSEPMAFFQALKEFAP GRMSKRYTVKSWNVPDWLVPADFNPVPDATVDVDFDIEEAFGSIGKQVHQEDISHEGEQI PVYQPRFVRTQRSSNPVLSNKSSSVLRWHFDISEPKSLSHINVPQNSEWHNVLRGIEFFT HDHSAPVELVRYCTGAKACIPFSSGDNANVNFNWTLEGEPAAIGTKLWVDSAKFSFSFSE ADIKGLLRHEQNKKSLYYQYLQHAFVHSDCYKDNFFFANWVFECLICSLLVLSEQKGQAL HESFEYLYSQQGKQVVDGVINGLFQRRETADGNDEEQDLHKRLTEYFSEESNLHDMKGAL RLEPDYADNSEYYSWARDLLGQTLCGGINAMFLKLVSDVSEQSFSLDHRWDGEQLNVWVN ENEVGGIGYITKFREVFKEDPLRTLGHLTHAFEIGEYEQVNFDLQYFLDELNGNVALRDT LNQVRSAKSLAERSENTKRLKQQIAKLGILPTHTWESVLYSRVLKSGANEKSDQRLTELL QQWTGYEERSELEIPLHIASYVLAAKQGGTYSDIYREKNRIQSRMWQRGAIIREQELGFY NQFSASNNKTERLLLSKVITNTETLVDYDERGEWLQTLSNALQATGKGTLVFTGQERGSV KSVISQLNVSMLEYNKMLFYPRITKLQTRLSSIHVTVEVRDILQ NT seq 4455 nt NT seq  +upstreamnt  +downstreamnt atggatacgcaaaaactgattgaagcacttgatagattagagaataaggaaacggaactt ttagcttggggggatatcgatgtatcttcgagtgaagctgaaattcgagatagtatccga gagtctggcgtcaacgatatttttgtcgatgagtattttgatgcgttgaaaagccggtgt tttatctttgaagtcgaagcagggaaatatcgctcaagaatggctgaaactgttcgactt caggtgctatcacgccagtggtttagaagtaaaggtgcagaagataccaagccgcttatt tctgactttcgttttttaaaacgcgcgcgccagtacccgaagcgagataagcatgctaaa acgctgattgataattgggaacaaaaccgattatttagttcagcagaagaaaaggtcata ctcagcaatcttctaaaaaatggagatgactggtttaagttgtctggttttcaggtgcgc tcaacagagcgcattttagaaaagtttgataagcataaatataagagtgctaaggatgcc agcgcgacgatcgtttgtgctggaacgggcagtggtaaaacgctgtctttctaccttcca gccatgactaagctggcggctagtttgcttcaagatgctcagcctcgcgttcgaattctg gctatttatccccgaaaggaactgctgaaggatcagtttgcagaaacctataaagaagcg cgaaaacttgatgactacctgctttctaaaggtcggcgtaaaatttccataggcaccttc tatggcgataccttttttgaaaattataccaaggacggcgctgcttttgaggcgatggtc tgcccgcaaaagccaaatggaaaacactgtggcggcacactgaactttagcaaagccacg aagcaggttatttgtcgctcctgtagtgctgttttgccggaagatgaaattctggcaaca agagagcgcgttaaaaaatcgccacctgatatcctgtttacaacgactgagatgctcaac cagcgcctgagtgatgggtactccaatcatcttttcggtgtcacccgagatcaaaagtcg attccactggtgttattggatgaagtgcatacctatgaagggagtaccggtgcacaaacg tcatatcttttaaaacgctggatgaaattcagtggcatcaagccgcattttgtcggttta tcggcaaccttggcagacgcgaagaacttttttgcggatttgaccggcactaaatctcac tttaccgagttggttgaatcgttcgaacacgagttagaagaagaaggcgctgaatatatg ttagcgctgcgcggggatcctgcatctcaaacgggtttgttatctgctacaattcaggca accatgcttggcagtcgtatgctggatacgcaccaaggggtgggcaagaacatatctcag ggcatctttggacagaaagcgtttgtgtttactgatgaccttgatgtgattaatcgcctt tataacgattatttagattcggaaggtaagaaagacttctacggtgaaataagacctaga gatggggacgattcgccacttgcttggctacgttcctctcaccacccaaactatgaccaa gaacgtcaaaaggtgttagggcttgattggtcttctgctgaggagatcggccataatttg tctgaatctactcaggttgaaagaacatctagtcaagatagcggagtaaatcaaaccgct aatgtggtggttgcaacggcctctttagaagttgggtataacgaccctgatgtaggcctt gtcattcagcataaggcaccccgcaatgttgcttcttatttgcaacgtaaggggcgtgca ggccgacgccgtggcatgcgcccgtggatgtataccattttgtcagactttggtagggat cgaattgcgtttcagcagtatgagcaattaattgacccaaaggtcaaaacgacaaagttg ccaattgaaaactctcacatacataagatgcatgccgccctcgctacgttagagtggtta gtgaaagagtaccgtatggactgggtgaacgtttgggcagtactcagagaaccaaaccga gccgacaaagaaggtaaacttacgaatggaaaaagccttcagcaaattaaggatgccgtt acagatgtaatggcatctcaggcaaaaacgcgccagttgacagactatttacaagacacg cttaccctcagtgatgatcaggtcaaagtggtgatgtgggcaccgccacgttcgatcatg atgtctttcctacctgaacttcgtcagaacttacagtttaaatggggtgcgaaaggaaaa cggtgggatagcttggtcgagcagcagtctgggcctatgccgaagtatatttcttcgcaa ttgttttcggcactggatacacaagcgctgacgattgcattggatcgttcaactaagaaa gaactccgcacaaacagcgagccaatggccttcttccaagcgttaaaagagtttgctcca gggcgtatgtctaagcgctatacggtgaaatcttggaatgtgcctgactggctggtaccg gcagactttaatccagtgccagatgcgacggttgatgttgacttcgacatcgaggaagca tttggcagcattggtaaacaggttcaccaggaagacatttcacatgaaggagagcagatc ccggtgtatcaaccgaggtttgtccgcactcagcgttcaagtaatcccgtactgagcaac aaaagcagcagtgtgttgcgatggcattttgatatatcagaacctaaatcactcagtcac atcaacgtgccccagaacagtgaatggcacaatgtacttcgtggtatcgagtttttcact cacgaccactcagctcccgtggaacttgtacgttattgcacgggtgcaaaggcgtgcatt ccattttctagtggtgataacgcgaatgttaactttaattggacgcttgaaggggagcct gcggccatcggcaccaagttgtgggtagatagcgccaagttttcgtttagcttttctgaa gcagatataaagggtcttcttcgtcacgagcagaacaagaaatccttgtattaccaatac cttcaacatgcgtttgttcattccgattgttacaaagataactttttctttgcaaactgg gtattcgagtgcctgatatgttcgttgcttgttttgagcgaacagaaagggcaagcatta catgaatcctttgaatacctttattctcagcaaggaaagcaagttgtcgacggggttatt aacgggctttttcagcggcgagaaaccgcagatggcaatgatgaagagcaagatcttcac aagcgcttaactgagtatttttcagaagaaagcaatcttcatgatatgaaaggggcgcta aggcttgaaccagattatgcagataactctgagtactacagttgggcaagagatttactg ggacaaactttgtgcggtggcattaatgccatgttcctgaaactggtctcagacgtatcg gaacagtcctttagcttggatcaccgttgggacggagagcaactcaacgtatgggtaaac gaaaatgaagtgggtggaattggttatatcaccaagtttagagaggtgtttaaggaagac ccgcttcgcacccttgggcatttgactcatgcatttgaaattggtgaatacgaacaggtg aatttcgacctacagtattttctcgatgagttgaacggtaacgtagcattgcgtgacact cttaatcaggtacgtagtgcgaaatcgctggctgaacgttctgaaaatacaaaaagatta aaacagcagatcgctaaactcggcatattacccacccatacttgggagagcgttttatat tcgagagtattaaagagcggtgctaacgagaaatcagatcaacgactcacggaactcctg cagcaatggacgggctatgaggagcgaagtgaactggagatccctcttcatatcgcatct tacgtgcttgcggccaagcagggtggaacatacagcgatatctatcgtgagaaaaaccgt attcagtctcgcatgtggcagcggggagcaataatccgcgaacaagagttgggcttttat aaccagttcagtgccagcaacaataaaactgagcggttattgttgtcgaaagtcattaca aatacagaaaccttagtggactatgacgagcgcggcgaatggctgcagacattgtctaat gctttgcaagccacaggaaaaggcacactggtgtttacgggtcaagaaagaggctctgtg aagtcagtgattagccaattgaatgtcagcatgctggagtacaacaaaatgttgttctat ccacgaattactaaactgcaaacccggttgtcatcgattcatgtgaccgtagaagtgaga gacattttacaatga

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