Pseudoalteromonas spongiae: PSPO_a2891
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Entry
PSPO_a2891 CDS
T05098
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pspo
Pseudoalteromonas spongiae
Pathway
pspo03030
DNA replication
pspo03410
Base excision repair
pspo03420
Nucleotide excision repair
pspo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSPO_a2891 (polA)
03410 Base excision repair
PSPO_a2891 (polA)
03420 Nucleotide excision repair
PSPO_a2891 (polA)
03440 Homologous recombination
PSPO_a2891 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspo03032
]
PSPO_a2891 (polA)
03400 DNA repair and recombination proteins [BR:
pspo03400
]
PSPO_a2891 (polA)
Enzymes [BR:
pspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSPO_a2891 (polA)
DNA replication proteins [BR:
pspo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSPO_a2891 (polA)
DNA repair and recombination proteins [BR:
pspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSPO_a2891 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSPO_a2891 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ATC99771
LinkDB
All DBs
Position
I:complement(2781956..2784694)
Genome browser
AA seq
912 aa
AA seq
DB search
MAQIPENPLILVDGSSYLFRAYHAPPHLTNSKGEATGAIYGVINMLKSLVKQYSPSHMVV
IFDAKGPTFRNDMYSEYKANRPPMPDDLRTQIEPIHNIIKAMGLPLISIPGVEADDVIGT
LAKRASEQKRHVLISTGDKDMAQLVDEHVTLINTMTNTIMDPAGVVDKFGIGPELIIDYL
ALMGDKVDNIPGVPGVGEKTALAMLQGLGSIDSLYDNLDKIADLGFRGSKTMSKKLEDNK
EQLRLSYELATIKLDVEVEQNLDSFEVAAPNTDELIKLYGECEFKRWLSELLDGDTAPAA
EVEVATKPVETNYETILTEAQLDSWVAKLQAADLFAFDTETTSLDYMQADLVGMSFAVTE
AEAAYLPLKHDYLGAPAQLSHELVFAKLAPILADENKAKVGQNLKYDRSVLARAGIELNG
IRFDTMLESYVLNSVGTRHDMDSLALKYLGHKNISFEEIAGKGKAQLTFNQIELEKAAPY
AAEDADITLRLHNTLWPMLEKEPELVDVFNSIELPLVNVLSDMERTGVHIDSQMLAQQSV
EIAARLEELEKEAYEIAEEEFNLSSTKQLQGILFEKLGLPVLKKTPKGAPSTAEEVLQEL
AHDYPLPKLIIEHRGLAKLKSTYTDKLPKMVDEVTQRVHTSYHQAVTATGRLSSSDPNLQ
NIPIRNEAGRRIRQAFVAAPGKLIMAADYSQIELRIMAHLSQDNGLLSAFAEGKDVHSAT
AAEVFGVPLETVTSDMRRKAKAVNFGLIYGMSAFGLSRQLDIPRNEAQHYMDTYFERFPG
VLEYMERTREDAAEKGYVSTLFGRRLYLPDIKARNGARRKAAERAAINAPMQGTAADIIK
RAMINVAGWLKTQSSDDIEMIMQVHDELVFEINADKVDEFSDKICSLMSEAAQLDVPLLV
EADSGDNWEQAH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccctgaaaatccgttaatcttggttgatggttcatcatacttattccgt
gcttaccatgctccaccacatctaactaactcaaaaggtgaggccaccggtgctatctat
ggtgtaattaatatgcttaagagtttagttaagcagtattcgccaagtcatatggtagtg
atctttgacgccaaaggtccaacttttcgcaatgatatgtattctgaatacaaggcaaac
cgcccaccgatgcctgatgatctgcgcactcaaattgagcctattcacaatattatcaag
gctatgggtttaccgcttattagcattccgggtgttgaagccgatgatgtaattggcaca
ttagcgaaacgcgcgtcagaacaaaaacgtcatgtacttattagtacaggcgataaagat
atggcgcagttagttgatgagcatgtaacacttatcaacaccatgactaatacgattatg
gaccctgctggagttgttgataaatttggtattggtcctgagttaatcatcgattatctc
gcattaatgggcgataaagtcgataacattccaggtgtaccaggtgtgggcgaaaaaacg
gctcttgcaatgctgcaaggactcggctctattgattcactttacgataacttagacaaa
atcgcagatcttggtttccgtggttcaaaaaccatgtcgaagaaactagaagataataaa
gaacagcttcggctttcttatgagcttgcaacgattaagttggatgtagaagttgagcaa
aacttggattctttcgaagttgcggcgccaaatactgatgaattgatcaagctttatggc
gagtgtgaatttaagcgttggttaagtgaattacttgatggtgacaccgcacctgctgcg
gaagttgaagtggcaactaaacctgttgaaacaaattacgaaacgatattaactgaagca
cagttagatagttgggttgctaaattacaagcagcagatcttttcgcatttgatactgaa
accaccagtcttgattacatgcaagctgatctagtcggtatgagctttgcggtaacagaa
gcggaagcagcttatttgccgcttaaacatgattatttaggtgcgccagcacaactcagt
cacgagctagtatttgctaaacttgcgccaattttagctgatgaaaataaagcaaaagta
gggcaaaaccttaaatacgataggagcgtattagcacgagcgggtattgaacttaatggt
attcgttttgataccatgcttgagtcttacgtactcaatagtgttggtactcgtcatgat
atggactcacttgcgctaaaatatctcggccataaaaacataagttttgaagaaattgca
ggtaaaggcaaagcgcagctaaccttcaatcaaattgagctagaaaaagcggcaccttat
gcggcggaagatgccgacataaccttgcgattgcataatacgctttggccaatgttagaa
aaagagcctgagctagtggatgttttcaattcaatcgaattgccattggtaaatgtgtta
tcagatatggaacgtaccggtgttcatattgatagccaaatgttggcacagcaaagtgtt
gaaattgcagcgcgtcttgaagagctagaaaaagaagcgtatgagattgcagaagaggag
ttcaacctaagctcaaccaagcaattacaaggtattctgtttgaaaaacttggcttacca
gtattaaagaaaacaccaaaaggtgcgccgtcgacagcggaagaagtgctgcaagaactt
gctcacgattatccattgcctaaattgattattgaacaccgtggtttagccaagctcaaa
tcaacgtatactgataaattacctaaaatggtagatgaagtaactcagcgtgtgcatact
tcgtatcatcaagcagttaccgcaacaggtcgcttaagttcaagcgatcctaacttacag
aatattccaattcgtaatgaagcaggtcgccgaattcgtcaggcctttgttgcggctcct
ggcaaattaataatggcggctgactacagtcaaattgaattgcgtattatggcgcattta
tcgcaagataacggcctattaagtgcatttgctgaaggtaaagatgttcacagcgcaacg
gctgcggaagtatttggtgtaccacttgaaaccgttacatctgatatgcgtcgtaaagct
aaggctgtaaacttcggtctaatttacggcatgagtgcctttggtttgtcacgtcaacta
gatatcccgcgtaatgaagcacaacattatatggatacctattttgaacgcttccctggt
gtacttgagtatatggaacgcacgcgtgaagatgccgctgaaaaaggttacgttagtacc
ttatttggtcgtcgtttatatttgccagatattaaagcgcgtaatggtgcgcgtcgtaaa
gcagctgaacgagcggcaattaacgcgccaatgcagggcactgctgccgatatcattaag
cgcgcaatgatcaatgtagctggttggctgaaaacgcaatcgtcagatgatattgaaatg
atcatgcaagttcacgatgaattggtgtttgaaattaacgcagataaagtggacgaattt
agcgataaaatttgttcattgatgagtgaagcagctcagttggacgtaccattattagtg
gaagctgattcaggtgacaactgggagcaggctcactag
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