Pseudoalteromonas spongiae: PSPO_a3147
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Entry
PSPO_a3147 CDS
T05098
Name
(GenBank) hypothetical protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
pspo
Pseudoalteromonas spongiae
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspo03000
]
PSPO_a3147
Transcription factors [BR:
pspo03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSPO_a3147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
PAS_4
AAA_5
HTH_8
Mg_chelatase
AAA
PAS_3
MCM
AAA_19
AAA_2
AAA_16
bpMoxR
AAA_3
PAS_8
AAA_7
AAA_22
CheZ
ABC_tran
GAF
PAS_7
Mov-10_helical
DUF3181
Motif
Other DBs
NCBI-ProteinID:
ATC99992
LinkDB
All DBs
Position
I:3022525..3023946
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AA seq
473 aa
AA seq
DB search
MDNLKNLLADSELLLNAVGEGVYGFDLEGKAVFINPAAERMTGWQAGELLGEKIHQYHHH
SHADGSPYPAHECNIYATMQDGQERSISHEVFWRKDGSSFPVEYTSTPVYKNGEIVGAVA
IFRDVTKQQESDRALREALAQVQALSEQLQAENTYLQSEIDENWSDSGLVGQSPRFKQLL
EQVSLVSKTDSTVLILGENGTGKELIARNIHRLSKRCHNTLVKVNCAAFTPSLLESELFG
HEKGAFTGATERRKGRFELADKGTLFLDEVGELSLEAQSKLLRVLQEQEFERVGGNQTIK
VDIRVIAATNKDLLKMVQQGEFRMDLYYRLNVFPLTMPALRERLDDLPLLCHNIISELAR
KLSKPIKGISKASLKRLATYHWPGNIRELQNVLEREVILSQSSLIQIKQDFQANLDASNF
AQLTLAEMERSYIEQVLEQCSGKIGGSNGAAKLLDLPESTLRSKMKKLGITRI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggataatcttaaaaacttgctagcagactcagagctattgttaaatgcggttggtgaa
ggcgtttatggatttgatttagaaggaaaagcagtatttataaaccctgccgcagaacgc
atgacaggttggcaagccggcgaattactcggcgaaaaaattcatcaatatcatcatcat
agccacgccgatggcagcccatacccagcgcatgaatgtaatatttatgccaccatgcaa
gacggacaagagcgcagtattagccatgaagtattttggcgcaaagatggctcaagcttt
ccagtggaatacacctcaactcccgtttataaaaatggcgaaatagttggtgctgttgca
atcttccgcgatgtaactaagcagcaagaaagcgatcgcgcactgcgtgaagcactagcc
caagtgcaagccttatctgaacaattacaagcagaaaatacttatcttcaaagtgaaatc
gacgaaaactggagcgactctggcttagtaggacaaagcccgcgatttaagcaattgctt
gaacaagtaagtttagtcagtaaaaccgacagcactgtgctgatcttaggtgaaaacggc
acaggtaaagagctgatagcccgtaatattcatcgcttaagcaaacgctgtcacaatact
ttggttaaagtaaattgcgcggcctttacacctagcttgttagaaagtgagctgttcggt
catgaaaaaggcgcatttactggcgctaccgaaagacgtaaagggcgatttgaactagca
gacaaaggcaccttgtttttagacgaagttggcgagctaagccttgaagcacagagcaaa
ttgctgcgtgtactgcaagaacaagaatttgaacgcgttggcggtaaccaaacgattaag
gttgatattcgcgttatcgcagcaacgaacaaagacctattaaaaatggttcagcagggc
gagtttcgcatggatttatattatcgcctgaacgtttttccccttaccatgccagccctc
agagagcgcttagatgatttgcctttgctttgtcataacattatttcggagcttgctcgc
aaattgagtaaaccaatcaaaggcatcagcaaggccagtttaaagcgccttgcaacctat
cattggcctggcaatattcgtgaactgcaaaacgtattagagcgcgaagtcatcttaagt
caaagttcgctaattcaaatcaagcaagattttcaagccaacttagatgccagtaacttt
gcacaacttacgctagcagaaatggaacgctcttacatagagcaagtgcttgaacaatgc
tcaggtaagataggcgggagcaatggcgcagccaaactactcgatttaccagaaagcacc
ttgcgctcaaaaatgaaaaagctcggtattacacgaatataa
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