Pseudoalteromonas spongiae: PSPO_b0028
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Entry
PSPO_b0028 CDS
T05098
Name
(GenBank) hypothetical protein
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
pspo
Pseudoalteromonas spongiae
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspo03000
]
PSPO_b0028
Transcription factors [BR:
pspo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSPO_b0028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
Motif
Other DBs
NCBI-ProteinID:
ATD00141
LinkDB
All DBs
Position
II:complement(19938..20837)
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AA seq
299 aa
AA seq
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MQIHDVDLRLLRIFVAIVECGGLSAAESRLNIGRSTISSHLSDLEVRLGIKLCKRGRSGF
ELTEPGRITYQASLELLQQCEAFATTVAGSKNELSGRVTISVIDTMVSDPRCGISEVIRE
LKQKSDNIQFDINVCEAREVETSVVNGRSLVGLGVSRHHLRGLDYFPLHNETNYLYCAKG
HALFDCKPNERNKLLKQAEVITSNYMRDKEVRNDGLNYQNSATAYHDEGIAHLILSGAFI
GYLPEHYANYWVDKGVFKAIHPEKYHYQIPVMLITKKMSSVSPLAKALVEEIKRCHQAY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcatgacgttgatctgcgcctattgcgcatatttgttgcaattgtggaatgt
ggcgggctctctgccgcagaatctcgactgaatattggccgctctacaatcagttcacat
ttatcggatttagaagtgcgccttggcatcaaactatgtaagcgcggacgcagtggtttt
gaactgaccgagcctggccgtattacataccaagcaagccttgagttattacagcagtgc
gaagcgtttgccaccacagttgcaggctctaagaatgagctatcaggccgcgtgacaatt
tcggtgattgataccatggtaagcgatccacgctgcggcattagtgaggtgatccgcgag
ctaaaacaaaaaagcgataatattcaatttgatatcaatgtgtgtgaggcgcgggaagta
gaaacttctgtggtaaatggtcgctcgctggtggggctgggcgtaagtcgccatcatttg
cgtggtttagattacttcccgctacataacgaaaccaactatctatattgcgccaaaggg
catgccctttttgattgtaaaccgaatgagcggaataaattattgaagcaagccgaagtg
attacctcaaactatatgcgggataaagaagtgcgcaacgatggtcttaattatcaaaat
agtgcaacggcgtatcatgatgaaggtatcgcacatttgatattatcgggtgcctttatt
ggctatttaccagagcactatgcaaattactgggttgataaaggggtattcaaagcaatt
caccccgaaaaatatcactatcaaatccctgtaatgttaatcactaaaaaaatgagctca
gtttcgccgcttgccaaagcacttgtcgaagagattaaacgctgccatcaagcctattaa
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