Pseudoalteromonas spongiae: PSPO_b0152
Help
Entry
PSPO_b0152 CDS
T05098
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pspo
Pseudoalteromonas spongiae
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspo03400
]
PSPO_b0152 (phrB)
Enzymes [BR:
pspo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PSPO_b0152 (phrB)
DNA repair and recombination proteins [BR:
pspo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PSPO_b0152 (phrB)
Prokaryotic type
PSPO_b0152 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ATD00243
LinkDB
All DBs
Position
II:136058..137509
Genome browser
AA seq
483 aa
AA seq
DB search
MSIAVVWLKRDLRLSDHAPLLEAAKTGLPILLVYCFEDMLLDDAHYSERHWRFVSQSLRD
MANKLPAGALYVAKGDALAVFQALSLKYGISQVFSHQEIGLDNTFARDKAFATWCKSNQI
IWHETPLGAVQRGLTHRTHWDENWQRVMRAPCLNLDLNKVNWFKNNEFECQLPHFETRFQ
NIQGQFQNGGESEAFNVLNDFFTARGKEYAFTLSSPSLSQIHCSRLSPYLAWGNISLRQV
YQTVLSHWQVPGWRRSLVAFTSRLHWHCHFIQKFESECEMEFRHVNKGYDDLPRVTGELA
EQRLHAWKTGQTGIPMVDACMRCLIETGYINFRMRAMLVSFLCHHLELDWRAGVAHLASL
FLDFEPGIHYSQFQMQAGVTGINTIRIYSPVKQGEEKDEKGVFVRKWVPELCEVPAPLIH
SPWQLSQMEQMMYGFTLGEDYPEPIVDVKQSYKDAQALLWLWRKKPKVVIESKRLLYRHV
RPN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgcagttgtttggttaaaacgtgatcttcgcttgtctgatcacgccccactg
cttgaagcagcaaaaacagggctaccgatattattggtgtactgttttgaagacatgttg
cttgacgatgcgcactattctgagcgccattggcgctttgtctcgcagtcattgcgcgat
atggcaaacaagttgccagcaggcgctttgtatgtcgcaaagggtgatgctctagcggta
tttcaggcgcttagtcttaaatacggtatttcgcaggtgttttctcatcaagaaattggc
cttgataacacctttgcgcgcgataaagcgtttgctacttggtgtaaaagcaatcaaata
atatggcatgaaacccctttaggggcggtgcaacggggattaacccatcgcactcattgg
gatgaaaactggcagcgggtaatgcgcgcgccttgtttgaatcttgatttaaacaaggtt
aactggtttaaaaataatgagtttgaatgccagttgccacactttgaaacacgctttcaa
aatattcaggggcagtttcaaaatggcggcgaaagcgaagcatttaatgtgcttaatgat
ttttttaccgctcgcggtaaagagtatgcatttaccctttcaagcccaagtttaagtcaa
attcattgctcgcgattatcgccgtatttggcgtggggcaatattagtttacgccaagtg
tatcaaacggtactcagtcactggcaagttcccggctggcgacgcagccttgttgctttt
acatcgcgacttcattggcattgtcactttattcagaaatttgaaagtgaatgcgaaatg
gaatttcgccacgttaacaaagggtatgacgacttaccacgggtgacaggtgaattagca
gagcaaagattacacgcttggaaaacgggacagactggtattccaatggttgatgcctgt
atgcgctgcctaattgaaactggttatataaattttcgcatgcgcgccatgttagtgagt
tttttgtgtcatcacttagagcttgattggcgcgcaggtgtagcgcaccttgccagttta
tttttagatttcgagcccggtattcattacagtcaatttcaaatgcaagcgggtgtgaca
ggtattaataccattagaatttatagccccgtaaaacagggggaagaaaaagacgaaaaa
ggcgtctttgttagaaagtgggtgcctgaactttgtgaagtaccagcaccattgatccac
agtccgtggcagttatcacaaatggaacaaatgatgtatggctttacattgggtgaagat
tatcctgagccgattgttgatgtaaaacaaagctataaagatgcacaagcgttactttgg
ttatggcgtaaaaagccaaaagtcgtgattgaaagtaagcggttactttatcgccatgtt
aggccaaattag
DBGET
integrated database retrieval system
