Pseudoalteromonas spongiae: PSPO_b0154
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Entry
PSPO_b0154 CDS
T05098
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pspo
Pseudoalteromonas spongiae
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspo03400
]
PSPO_b0154
Enzymes [BR:
pspo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PSPO_b0154
DNA repair and recombination proteins [BR:
pspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PSPO_b0154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ATD00245
LinkDB
All DBs
Position
II:137651..139210
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AA seq
519 aa
AA seq
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MTSELRLILGDQLNAQHSWFKEKSHNVTYVIAELYQEASYTTHHIQKISAFFAAMHAFAG
ALEKAGHKVIYLTLDDTQKYADLPDLLNHLIKEHGIHTFCYQLPDEYRLRAQLTDYCQSL
SIDYKVFDTEHFYLADNQLASYFKHGKKHRLEHFYRKMRVEFNLLMNGDEPLTGQWNFDS
QNRNKLKASDLADIPEPLVFANDVSDILARIERHGIKTMGKAEKQLLWPINRSQAKQLLA
FFCKTLLPKFGQFQDAMTGKLIEFGEDKGWSLYHSRLSFAINAKMISPHCVVNAAIETFE
QNDDIDIAQVEGFVRQILGWREFVRGIYWANMPNYASLNALDAKLPLPSWFWSGNTKMRC
LFHAITQSLDYAYAHHIQRLMVTGNFCLIAGIHPDEVDDWYLGIYIDALEWVEMPNTRGM
SQFADGGIVGSKAYAASGNYIKKMSDYCSDCHYNVANTVGDDACPLNSLYWQFMDKHKDS
FTNNPRTKMVLSNWLKKPQGDRDKVLSRANFLLQNLENL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtgagcttcgtttaattttgggcgaccagcttaatgctcagcattcttggttt
aaagaaaagtcgcacaatgtaacgtatgtgattgccgagctatatcaagaagcgagttac
accacccatcatatacaaaaaatatcggcgttttttgcggcaatgcatgcatttgctggc
gcattagaaaaagctggtcataaggtgatttacttaaccttagacgacacgcaaaagtac
gctgatttacccgacttattaaatcatttaatcaaagagcacggtattcataccttctgc
tatcaattgcccgatgagtaccgtttacgtgcccagctaactgattactgtcaaagcctt
tctatcgactacaaggtatttgataccgagcatttttacttggctgataatcaattagcc
agttatttcaagcatggtaaaaaacaccggttagagcatttttatcgcaaaatgcgcgtg
gaatttaatttattaatgaatggcgatgaaccccttacggggcagtggaattttgatagt
caaaaccgcaataagttaaaagcaagtgatctcgccgatattcctgagccacttgttttt
gctaatgatgtcagtgacattttggcgcgcattgaaaggcatggcattaaaactatgggt
aaagcggaaaaacaattgctgtggccaattaatcgcagtcaagcaaagcagctgctcgcc
tttttctgtaaaacgctattaccgaagttcggtcaatttcaagatgcaatgacaggcaaa
cttattgagtttggtgaggataaaggctggagtttatatcattcaaggttatcgtttgcc
attaatgcaaaaatgataagcccccattgcgttgtgaatgctgccatagagacctttgaa
caaaatgacgacatagatattgcacaggtagaaggctttgttaggcaaattttaggctgg
cgtgaatttgtgcgcggtatttattgggccaatatgcccaattacgcatcgcttaatgcc
cttgatgcaaaattgccactaccaagttggttttggagtggaaacaccaaaatgcgctgc
ctgtttcatgcgattacccaatcacttgattatgcatatgctcaccatattcaacgctta
atggttacgggtaacttttgcttaatagcaggtattcaccctgatgaggtcgatgactgg
tatttaggcatttatatcgacgcacttgagtgggtagaaatgccaaatacgcgggggatg
agccagtttgccgatggcggtattgttggttctaaagcctatgccgcaagtggtaattac
attaaaaaaatgagcgactattgcagtgattgccattataacgtagcaaacactgtgggt
gatgatgcttgcccgcttaactcactttattggcaatttatggataaacataaagacagt
tttaccaataacccacgcactaaaatggtgttaagtaactggcttaaaaaaccacaaggt
gatcgcgataaggtgcttagtcgcgcgaactttttactgcaaaatcttgaaaatttgtaa
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