Pseudoalteromonas spongiae: PSPO_b0354
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Entry
PSPO_b0354 CDS
T05098
Symbol
treX
Name
(GenBank) glycogen operon protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pspo
Pseudoalteromonas spongiae
Pathway
pspo00500
Starch and sucrose metabolism
pspo01100
Metabolic pathways
pspo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PSPO_b0354 (treX)
Enzymes [BR:
pspo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PSPO_b0354 (treX)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
ATD00406
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All DBs
Position
II:302698..304824
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AA seq
708 aa
AA seq
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MVSARFAIRPGNTSPLGATPSENGTNFAIFSERATKVELCLFDQSGHSEIARIPLYRDEQ
DIWHIFIRGVGQDQLYGYRVYGKYNPKKGCYFNPNKLLLDPYAKSLFGEFSWGNAHSADE
AFWQLDSAMDMPKCKVSTLPYYTGTKPNIPWHKTVIYECHAKGATKQYTSIPEELRGTYL
GLAHPNFIWHLKSLGITAIELLPVHSFISEAFLPERGLSNYWGYNTLNFFTPHLAYAHTK
QEREFQQMVSVLHDAGIEVIIDVVFNHTAEGNEQGPTLSLRGIDNQTYYRLQHNNFAYYV
NDTGCGNTLNISHPKSLQLVMDSLRYWVQVYGVDGFRFDLASILGRDQDGFKKHHTFFQT
LAQDPVLKGVKLIAEPWDLAIDGYQLGNYVAPWREWNDQYRDTVRSFWRGDTSMLPEFAR
FFHGSSHLFEKKGRSVTSSINFITAHDGFTLADLVSYTNKHNLANQEENRDGHDHNLSTN
WGVEGQTENSEINALRLRAQKNLLLTLCLSNGVPMLCGGSEVAHSQGGNNNAYCQDNEIS
WIDWHANGLGEPQQHPLYQFISRALKLRSEFSLYRQSHFIHDDDPRFSVTWLNEHGALMQ
DSDWHNPDGHCLGYLMEDIQDDKALLLLFNASSNNVMFKLPEQEAHHCWRIRLSSYSNER
DNECVSPGQMLTLSSYSAWVLSSHIKMPASKQHATDTSQTFNLTKQGV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggtctcagcccgttttgcaattcgcccgggaaacacctcgccactgggtgcaacccca
agtgaaaacggcactaactttgctattttctctgaacgcgcaactaaggttgagctgtgc
ttgttcgatcaaagtggtcacagcgagatagcgcgcattccactttatcgcgatgagcaa
gatatttggcatatttttattcgcggggtggggcaagatcagctctacggttaccgagtt
tacggcaaatacaacccaaaaaaagggtgttactttaatcccaacaaactgctgttagac
ccttatgcaaaatcattgtttggtgagtttagctggggcaatgcacacagtgcagatgaa
gcgttttggcagcttgattcggcaatggatatgccaaaatgtaaagtatcaacactgcct
tattacacgggtactaaaccgaatattccgtggcataaaacggttatttatgaatgccat
gccaaaggcgcaactaaacaatatacctctattcccgaggaattacgcggtacttacttg
ggtttagctcaccccaactttatttggcatttaaaaagtttaggcattacagccatcgag
ttgttaccagtgcatagttttattagtgaagcgtttttacctgaaagaggtcttagtaac
tattggggttacaacacccttaacttttttacgccgcacttagcctatgcccatactaag
caagaacgagagttccagcaaatggtatcggtactacacgacgcgggtattgaagttatt
attgatgtggtttttaaccatactgctgagggtaacgagcaagggccaaccttgtcactt
cgtggcattgataaccaaacttactatcgattgcagcataataattttgcctattatgta
aatgataccggctgcggtaacacgctaaatatttcacaccctaaaagtttacaactggta
atggatagcttgcgctattgggtgcaagtgtatggggttgatggttttcgctttgattta
gccagtattttaggccgtgaccaagatggctttaaaaaacaccacactttctttcaaacc
ctcgcgcaagatcccgtattaaaaggcgtgaaactgattgcagagccttgggatttagcg
attgatggttatcaactcggtaattatgttgctccgtggcgcgagtggaacgaccaatac
cgtgacacagtgcgcagcttttggcgaggtgataccagcatgctgccagagtttgctcgt
ttctttcatggctcaagccatttgtttgagaaaaaagggcgttcggttacctctagtatt
aactttattaccgcccacgatggcttcaccttggccgatttagtgagttataccaataaa
cataatctagccaatcaggaagaaaaccgtgatggccacgaccataatttatcgaccaat
tggggcgttgaagggcaaaccgaaaacagtgaaatcaatgcattgcgtttgcgtgcacaa
aaaaacctgctgttaaccctatgtttatctaacggtgtgccaatgctgtgtggcggcagt
gaagtggcacattcgcaaggtggcaacaataacgcctattgccaagataacgaaataagt
tggattgattggcacgccaacgggttaggtgagccgcaacaacatccgctgtatcagttt
attagtcgcgctctaaaactacgcagtgaattttcgttgtatcgccagagccactttatt
cacgatgatgacccgcgctttagtgttacttggttaaacgaacacggtgcgctaatgcaa
gacagtgattggcataacccagacggccattgccttggttatttaatggaagatattcaa
gacgataaagcacttttactgctgtttaatgcctccagcaataacgtaatgtttaagttg
ccagagcaagaagcacatcattgttggcgtattcgactgtcatcgtattctaacgaacgg
gataatgaatgcgtaagcccaggacaaatgctcactctgagtagctacagcgcatgggtg
ctttcaagccacattaaaatgcccgccagtaagcagcatgcaacagatacatcccaaacg
ttcaatttaactaagcaaggagtttag
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