Pseudoalteromonas spongiae: PSPO_b0840
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Entry
PSPO_b0840 CDS
T05098
Symbol
fadD
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pspo
Pseudoalteromonas spongiae
Pathway
pspo00061
Fatty acid biosynthesis
pspo00071
Fatty acid degradation
pspo01100
Metabolic pathways
pspo01212
Fatty acid metabolism
pspo02024
Quorum sensing
pspo04146
Peroxisome
Module
pspo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSPO_b0840 (fadD)
00071 Fatty acid degradation
PSPO_b0840 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSPO_b0840 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSPO_b0840 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspo01004
]
PSPO_b0840 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspo04147
]
PSPO_b0840 (fadD)
Enzymes [BR:
pspo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSPO_b0840 (fadD)
Lipid biosynthesis proteins [BR:
pspo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSPO_b0840 (fadD)
Exosome [BR:
pspo04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSPO_b0840 (fadD)
Exosomal proteins of breast cancer cells
PSPO_b0840 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ATD00796
LinkDB
All DBs
Position
II:779613..781274
Genome browser
AA seq
553 aa
AA seq
DB search
MEKIWLKRYPAGVPAEIDPQHYDSLLELFEKSFQDYADLPAFENMGKVYTYQQMDDATKR
FASYLQNQLGVKKGDKVAVMMPNLLQTPIAILGTLRAGATVVNVNPLYTTRELEHQLNDS
ETSTIIILANFARTLEEALPKTNVKNIVVTEIGDMLGGVKKHLVNFVVKHLKKMVPSYSL
PNIIDFTDVMKSGDVSKYTRPHLTQDCLAFLQYTGGTTGVSKGAMLTHGNMVANLEQVTG
CLDPLLKKGKEMVVTALPLYHIFALTANCLTFMKYGGHNLLITNPRDMKGFIKELQGKKF
TVMTGVNTLFNGLLNTPGFSEIDFSSLKISLGGGMAVQRPVAEKWQTVTDSRLVEGYGLT
ECAPLVTVSPYDLAAFNGSIGLPAPSTELKIVKEDGTEAELGEAGELWVKGPQVMKGYYN
RPEASAECLKDGWFATGDVAKYDEEGFFYIVDRKKDMIIVSGFNVFPNEVEEVVAMHDGV
LEVAAVGVPHEVSGEQVKIFVVKKDQSLTEKDIIKHCRENLTNYKVPKFVEFREDLPKTN
VGKILRRALKEAS
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagatttggttgaagcgttacccagcaggtgttcctgctgagatagatccacag
cactatgactccctgcttgaactatttgaaaaaagctttcaagactatgcagatcttcct
gcctttgaaaatatgggtaaggtatatacataccaacagatggatgacgcaactaaacga
tttgcttcatatcttcaaaatcaactgggcgttaaaaaaggtgataaagttgcggtgatg
atgccgaacttattgcaaacgccaatagcaattcttggtacactgcgtgcgggcgcgact
gttgtaaatgtaaacccgctttacactacgcgtgagcttgagcatcaattaaacgattca
gaaacaagcactattattattcttgctaactttgctcgtacacttgaagaagcattacca
aagacgaatgttaaaaacatcgtagttactgaaatcggcgatatgttaggtggtgttaaa
aagcacttagttaactttgttgtaaaacaccttaagaaaatggtgccaagctatagccta
ccaaacattatcgatttcacagatgtgatgaaatctggtgatgtatctaaatatacgcgc
ccacatttaacgcaagattgtttagcattcttacagtataccggtggtactaccggtgta
tctaaaggtgccatgcttacacacggcaatatggtagcaaaccttgagcaagtaacgggt
tgtttagacccactacttaagaaaggtaaagaaatggtagtaacagcgctaccgctttat
catatttttgccttaaccgccaactgcctaacctttatgaagtacggtggtcataacctt
ttaatcactaatccgcgtgatatgaaagggtttattaaagaacttcagggcaaaaagttt
accgtaatgacaggtgtaaataccttgtttaacggcctgttaaatacgcctggattctca
gaaattgatttttcatcgctaaaaatatcgcttggtggcggtatggcagtacaacgccca
gttgctgaaaaatggcaaacggttactgattctcgcttagttgaaggttatggattaact
gaatgtgcgccacttgttactgttagcccgtatgaccttgcagcatttaatggctcaatt
ggtttaccagcaccaagcacagaacttaaaatcgtaaaagaagacggcactgaagcagaa
ctcggtgaagcaggggagctttgggttaaaggtcctcaggtaatgaaaggttattacaat
cgtccagaagcaagcgcagaatgtttaaaagacggttggtttgcaacgggtgacgttgct
aaatacgatgaagaaggcttcttctatattgttgaccgtaaaaaagacatgattattgta
tctggctttaacgtattcccaaatgaagtggaagaagtggtagcaatgcatgatggtgtg
cttgaagttgcggctgtcggtgtaccacatgaagtaagtggtgaacaagttaagattttt
gtcgtgaaaaaagaccaaagtctgacagaaaaagatataatcaagcactgtcgtgaaaac
ttgaccaattataaagtgccaaagtttgtggaattccgcgaagatttaccaaaaacaaat
gttggtaaaattttaagacgtgcacttaaagaagcaagttaa
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