Pseudoalteromonas spongiae: PSPO_b1516
Help
Entry
PSPO_b1516 CDS
T05098
Name
(GenBank) hypothetical protein
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
pspo
Pseudoalteromonas spongiae
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspo03000
]
PSPO_b1516
Transcription factors [BR:
pspo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSPO_b1516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
DUF6912
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ATD01353
LinkDB
All DBs
Position
II:1361007..1361903
Genome browser
AA seq
298 aa
AA seq
DB search
MSISSINRLKQMAIFCKVIECGSMRAASEALSMTPSAVSQYITQLENELEVALIYRSTRR
LSLSEAGKRYYQHGKRMLMAAEDAEDAIYEVKHSLEGEIRISATVGIASHPLAQGLKEIL
DNNIGLSITVIANDKSIDLVAEHIDIAVRVGEPEESNFIYHSLGKLAKSIFASPEYLKKH
SNPVLPSDLKKHYWLKHLSQGKFSDISLTHSNNETFHYQPKYRMRFNDINALTSHVQAGY
GMAILPDLEVQHLIKAGMLVKVLPDWQLDPLDLYALTIDRKQSYKVKAVLKALKEFFA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttcatcgattaatcgcctaaagcaaatggctattttttgtaaggttattgaa
tgtggcagtatgcgagcagcatccgaagcacttagtatgacgccttcagcagtaagccaa
tacatcacccagttagaaaatgagcttgaagttgcgctaatctatcgctcaacacgaagg
cttagtttgtctgaagccggtaaacgctactatcaacacggaaagagaatgttaatggct
gcagaagatgcagaagatgccatttacgaagtaaagcactctttggaaggtgaaattcgt
atttctgcaacagtaggcatagcatctcaccctttggcacaaggcttaaaggagatccta
gataacaatattggcttatcgattactgttatagcaaatgataaaagtattgatctggtt
gcagagcacattgatattgccgtgagagtaggcgagcctgaagagtctaattttatttat
cattctctaggaaaattagctaaaagcatctttgcaagccctgagtatctcaaaaagcat
agtaaccctgttctgccaagcgatctgaaaaaacactattggttaaaacacctaagccaa
ggaaaattttcggatatcagtcttactcattcaaataacgaaacatttcattatcaacct
aaatatagaatgcgctttaatgatatcaatgcgctcaccagccatgtgcaagctgggtac
ggtatggctattttgcctgatttagaagtccaacatttaatcaaggcaggtatgctagta
aaagtgttaccagactggcaattagatcccctagatttatatgcgttaaccattgataga
aaacaatcgtacaaagtaaaagctgttctaaaagcacttaaagagttttttgcttaa
DBGET
integrated database retrieval system