Pseudoalteromonas sp. PS1M3: PS1M3_00110
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Entry
PS1M3_00110 CDS
T11044
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psps Pseudoalteromonas sp. PS1M3
Pathway
psps00071
Fatty acid degradation
psps00280
Valine, leucine and isoleucine degradation
psps00310
Lysine degradation
psps00362
Benzoate degradation
psps00380
Tryptophan metabolism
psps00410
beta-Alanine metabolism
psps00640
Propanoate metabolism
psps00650
Butanoate metabolism
psps00907
Pinene, camphor and geraniol degradation
psps00930
Caprolactam degradation
psps01100
Metabolic pathways
psps01110
Biosynthesis of secondary metabolites
psps01120
Microbial metabolism in diverse environments
psps01200
Carbon metabolism
psps01212
Fatty acid metabolism
Module
psps_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PS1M3_00110 (fadB)
00650 Butanoate metabolism
PS1M3_00110 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PS1M3_00110 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PS1M3_00110 (fadB)
00310 Lysine degradation
PS1M3_00110 (fadB)
00380 Tryptophan metabolism
PS1M3_00110 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PS1M3_00110 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PS1M3_00110 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PS1M3_00110 (fadB)
00930 Caprolactam degradation
PS1M3_00110 (fadB)
Enzymes [BR:
psps01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PS1M3_00110 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PS1M3_00110 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PS1M3_00110 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PS1M3_00110 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
BBW89924
LinkDB
All DBs
Position
1:complement(12410..14569)
Genome browser
AA seq
719 aa
AA seq
DB search
MLYKSDSFEVSFLKENIAEFKFCVAGSVNTLSQKTLSDCAAALKELAANSDIKGMVFTSD
KDHFIIGADIFEFLPTFTKPEEDLVVWIKNATDVFDAIEDLPFPTLSVVNGLALGGGCEW
ALATDYRVASESAKMGLPEVKLGIMPGFGGTVRLPRIIGADNAMMWITSGAENRAADALK
VGAFDAVVSADKLLESSVATLELAIAGKLDWQAKRNAKLQPLKLNRVEQGMSFAMAEGMV
MGKTKGHYPAPVMAVRTIKAAANCTRDEAMAIENANFAKLARTNEAAAQTGIFLNDQFIK
GKARKLAKHSDVEIKQAAVLGAGIMGGGIAYQSAYKGTPIIMKDIQQDALDLGMGEASKL
LGAKVKRGHMPMEKMLATLSKIKPTLNDADLQDANIIVEAVVENPKVKQAVLADLEKNMP
EGTVLTSNTSTICIDLLAEALDKPENFCGMHFFNPVPKMPLVEIIRGAKTSDKTINAVVD
YALKLGKSPIVVNDCPGFFVNRVLFPYFAGFSKLVVEGANFAKVDKVMENVFGWPMGPAY
LLDVVGIDTAYHCTGVMADGFPERMARAEKDPVTVFANEKRFGQKNKAGFYKYETDRRGR
LKKSSDATAVELLAPITDAPKEFDKQEIIDRCMIPMINEVLLCLQEGIVASPQEADMALV
YGVGFPPFRGGAFRYLDQTGLANFVAAADKYAHLGAIYQVSEQTRKWAEEGRVFYKVEG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttatataaaagcgattcctttgaagttagcttcctaaaggaaaacatcgccgagttt
aagttttgtgttgcaggttctgtaaacacattatctcaaaaaactctttcagattgtgca
gcagcattaaaagaattagctgctaattctgatatcaaaggcatggtttttaccagtgat
aaagaccactttattattggcgccgacatcttcgaatttttacctacatttactaaacct
gaagaagatttagtcgtgtggatcaaaaacgcaactgacgtttttgatgcaattgaagat
cttccattcccaactctaagcgttgtaaacggcttagcacttggcggcggatgtgagtgg
gcacttgctaccgattatcgtgttgcaagcgaaagcgctaaaatgggcctaccagaagtt
aaacttggcataatgcctgggtttggtggcacagtgcgcttaccacgtatcattggcgca
gataacgccatgatgtggatcacttctggcgctgaaaaccgcgcagctgacgcccttaaa
gtaggtgcgtttgacgcagtagttagtgctgacaaacttttagagtcaagtgtagcaaca
cttgagttagcgattgcaggcaagctagattggcaagcaaaacgcaacgcaaaactacag
ccacttaaattaaaccgtgttgagcaaggtatgagctttgctatggcagaaggtatggta
atgggtaaaaccaaaggccactatcctgctccggttatggcagtgcgtactattaaagca
gcggcaaactgtactcgcgatgaagcaatggcaatcgaaaatgctaactttgcaaaactt
gcgcgtaccaacgaagcggcagcgcaaacgggcattttcttaaatgaccaattcatcaaa
ggcaaagcacgcaaacttgctaagcacagcgatgtagaaattaaacaagctgcagtatta
ggcgcgggtattatgggcggcggtattgcatatcagtctgcttataaaggcacaccaatc
ataatgaaagacatccaacaagatgcgcttgatttaggtatgggtgaagcgtctaaatta
ttaggtgcaaaagttaagcgtggccacatgccaatggaaaaaatgttggcaacactaagc
aaaattaagccaacacttaacgatgcagacctacaagacgctaacattattgttgaagcc
gttgtagaaaaccctaaagttaagcaagcagtattagcagaccttgaaaagaacatgcca
gaaggcactgtacttacatcaaatacgtcgactatctgtattgacctacttgctgaagca
cttgataaaccagaaaacttctgtggtatgcactttttcaacccagtgccaaaaatgcca
ttagtagaaattatccgtggtgcaaaaacgtcagacaaaacaattaacgcagtcgttgat
tacgcccttaaacttggcaagtctcctattgttgtaaacgattgcccaggcttttttgta
aaccgtgttttattcccttactttgcaggctttagcaaattagttgttgaaggcgctaac
tttgcaaaagtagataaagtaatggaaaacgtatttggctggcctatgggtccggcttac
ctacttgatgttgtaggtattgatacggcttatcattgtactggcgtaatggctgacggt
ttccctgagcgtatggcacgtgcagaaaaagatccggtaactgtttttgctaacgaaaaa
cgttttggtcaaaagaacaaagcaggtttttacaagtacgaaacagaccgtcgtggtcgt
cttaaaaaatcaagcgatgcaacagccgttgagctactagcgccaattactgatgcaccg
aaagaattcgataagcaagaaatcattgaccgttgtatgattccaatgatcaacgaagta
cttctttgtttacaagaaggcattgttgcttctccacaagaagctgatatggcacttgtt
tacggcgttggtttccctccatttagaggcggcgcgttccgttacttagatcaaactggt
ttagctaactttgttgcagcagctgacaaatacgctcacctaggtgcgatttaccaagta
tcagagcaaactcgcaaatgggctgaagaaggccgtgttttctataaggtggaaggttaa
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