Pseudoalteromonas sp. PS1M3: PS1M3_05360
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Entry
PS1M3_05360 CDS
T11044
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
psps Pseudoalteromonas sp. PS1M3
Pathway
psps00470
D-Amino acid metabolism
psps00550
Peptidoglycan biosynthesis
psps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PS1M3_05360 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PS1M3_05360 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psps01011
]
PS1M3_05360 (murD)
Enzymes [BR:
psps01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PS1M3_05360 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
psps01011
]
Precursor biosynthesis
Amino acid ligase
PS1M3_05360 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
BBW90449
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Position
1:585859..587193
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AA seq
444 aa
AA seq
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MQYLNEIKNKQITVLGLGVTGLGIVRFLLSHGLTPKVVDSRANPPGIEWLSSHAPSLNTH
FGSLNAAGLNSSDMIIVSPGLSLKTPAIASAINSGVEVIGDVELFARINTKPVVAVTGSN
GKSTVVTLAYDVLKAAGFNVALGGNIGTAVLDLLNDDFDVYVLELSSFQLDTTTSLKSVS
ATVLNVSEDHLDRYDSYQAYIDSKLSIYNGTQCLVVNEDDKQTHPSSSSATAKIGFGTQQ
GKYCLGQHNCSTYFFANNEAFLPVDTLAVVGKHNYLNTLAVMALLSPFNISKEAYKKALN
EFSGLAHRCQFVTQQHGVKYFNDSKATNVGATIAAIDSLATETQNLIVIAGGDAKGADLN
PLKPYLQKHVKALICFGKDAKKLVALSSKSHLTNNMSEAVNLAKQLSSPGNVVLLAPACA
SIDMYNNYMQRGDDFVKCVLADNI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatttaaacgagataaagaataaacaaataacagtgctcggactcggtgtaacc
ggtctgggcattgtgcgttttttactatctcacggtttaacgccaaaggttgtcgacagc
cgagcaaatcccccagggattgaatggctgagcagtcatgcgcctagtttaaatacacac
tttggcagcttaaatgctgctgggcttaatagcagtgatatgattattgtaagccctggg
ttaagccttaaaacgcctgccattgcgagtgctattaattcgggtgttgaagtcataggt
gatgttgagctatttgcgcgcattaatactaaacctgtagtggcagtgactggctcaaat
ggtaaatcaaccgtagtgactttagcctatgacgtgttaaaagcggctggctttaatgtg
gcacttggcggcaatattggtaccgcagtacttgatttactcaatgacgactttgatgtt
tatgtgcttgagctttcgagctttcaattagataccacaacaagcttaaaatcggtgagt
gccacggtgttaaatgtatctgaagatcatttagatcgttacgatagctaccaagcatat
atagactcaaagctatctatttacaacggtacacaatgtcttgttgtaaatgaagatgac
aaacaaacgcatccgtccagtagcagtgctacggctaaaattggttttggtactcaacag
ggtaaatattgtttagggcagcataactgcagtacgtattttttcgctaacaatgaagcg
tttttacctgttgatacacttgctgttgtaggtaagcacaattatttaaatacgcttgcg
gttatggcgttactaagcccctttaatattagtaaagaggcttataaaaaggcactaaat
gagtttagcggattggctcatcgctgccaatttgttactcagcaacatggcgttaaatac
tttaacgattcaaaggcaacaaacgtaggcgctaccatagcagccatagacagtttggcc
acagaaactcaaaacttaattgtgatagcgggaggcgatgcaaaaggcgctgatttaaac
ccgcttaaaccttacttacaaaagcatgtaaaagcgctgatctgttttggtaaagatgcc
aaaaagctagtggctctgagcagcaaaagccatttaacaaataacatgagtgaggcggtt
aatttagctaagcagcttagttcgccgggtaatgtagttttattagcgccggcatgtgca
agcattgatatgtataacaactatatgcaacgtggtgatgactttgttaaatgtgttttg
gcggataacatatga
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