Pseudoalteromonas sp. PS1M3: PS1M3_05740
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Entry
PS1M3_05740 CDS
T11044
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
psps Pseudoalteromonas sp. PS1M3
Pathway
psps00260
Glycine, serine and threonine metabolism
psps00630
Glyoxylate and dicarboxylate metabolism
psps00670
One carbon pool by folate
psps00785
Lipoic acid metabolism
psps01100
Metabolic pathways
psps01110
Biosynthesis of secondary metabolites
psps01200
Carbon metabolism
Module
psps_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PS1M3_05740 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PS1M3_05740 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PS1M3_05740 (gcvP)
00670 One carbon pool by folate
PS1M3_05740 (gcvP)
Enzymes [BR:
psps01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PS1M3_05740 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
BBW90487
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Position
1:625758..628649
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AA seq
963 aa
AA seq
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MSNAKSLEQLEQKQDFIRRHIGPSPAQVSDMLSALEVSSVQELIDQTVPANIRLEQPLSI
GESRTEVETLSYLKSVASKNKVFKSYIGQGYHPTHVPHVILRNVLENPGWYTAYTPYQPE
IAQGRLESLLNFQTMTLDLTGLDLASASLLDESTAAAEAMGLAKRVSKAKKANAFFIADD
VHTQTIDVVSTRAEQFGFEIIIGKAADAVNHDIFGALFQYPSTSGEIVDVTDLIAGVQSK
KAIACVAADIMSLLLLKAPGKLGADVVLGSAQRFGVPMGYGGPHAAFFATRDAYKRSLPG
RIIGVSKDRLGNDALRMAMQTREQHIRRDKANSNICTAQVLLANMAAFYAVYHGPQGLKT
IAQRIHRFADILAAGLKTKGIALKHSTWFDTLTIVGDNKDDVIARALAKGVNFATNHDGE
YSISVSETTTRADVAELFDIVLGEGHGLSVDSIAADIEANGSDSIPASLVRDDEVLTHPN
FNSYHSETDMLRYIKRLENKDLALNHSMISLGSCTMKLNATAEMIPVTWPEFANLHPFCP
LDQAEGYQIMINELHDWLVNITGYDAVSLQPNSGAQGEYAGLIAIRKYHESRGDAHRNVC
LIPSSAHGTNPASAQMASMKIVVVNCDKNGNIDMQDLKAKAEDVSENLSCAMITYPSTHG
VYEETIRELCDIIHEHGGQVYMDGANMNAQVGVTSPGFIGSDVSHLNLHKTFCIPHGGGG
PGVGPIGVKSHLAPFMPNHSVINVPGTNINNGAVSAAPYGSAAILPISWAYIAMMGSEGL
KQATEMAIVNANYLTQELSQHFPILYRGRNNRVAHECIVDLRPLKEASGITEMDVAKRLQ
DYGFHSPTMSFPVAGTLMIEPTESESKGEIDRFIEAMVSIKGEIDKVISGEWSIENNPLV
FAPHTQADVLGNEWDRAYDRFYAAFPVPSVAKDKFWPTVTRIDDVYGDRNLVCSCPAVET
YRD
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgccaaatctcttgaacagttagagcaaaagcaagattttattcgccgccat
attgggccaagcccagcgcaagtaagcgatatgctaagcgctcttgaagtatcaagtgta
caagagctgatcgatcaaactgtaccggctaacattcgcctagagcaaccgctaagcatt
ggcgaaagccgtactgaagttgaaacactaagctacttaaaatcagtagcaagcaaaaat
aaagttttcaaatcgtacattggccaaggctaccacccaacacatgtaccgcacgtaatt
ttacgtaacgtacttgaaaacccgggttggtatacagcgtacacgccgtatcagccagag
attgcacaagggcgtttagaatcattactaaacttccagactatgaccctagatttaacc
ggccttgatttagcaagcgcgtcgttacttgacgaatcaaccgctgcagccgaggcaatg
ggccttgcaaaacgcgtatctaaagctaaaaaagccaatgccttttttattgccgacgac
gtacacacacaaactatcgacgtagtaagcacccgtgctgagcagtttggttttgaaatc
attattggtaaagcggccgacgccgttaaccacgacatttttggtgcattattccaatac
ccgtctacatcgggcgaaatagttgacgtaaccgacctaattgctggtgttcaaagcaaa
aaagccattgcctgtgttgctgccgacattatgagtttattactattaaaagcaccgggt
aaactaggtgctgatgtagtacttggttcggctcagcgttttggtgtacctatgggttac
ggcggtccacatgctgcattttttgcaacacgtgacgcgtacaagcgttcattaccaggg
cgtattattggtgtatctaaagaccgtttaggtaacgacgcactgcgtatggcaatgcaa
acgcgcgaacaacacattcgccgcgacaaagccaactcaaacatttgtacagcgcaggta
ttacttgccaacatggcggcgttttatgcggtgtaccacggcccacaaggcttaaaaact
atcgcgcagcgtatacaccgctttgctgatattttagctgctggcctaaaaaccaaaggc
atcgcccttaagcacagcacgtggtttgatacgctaacaattgttggcgacaacaaagac
gacgtaatagcacgtgcacttgccaaaggcgttaactttgctacaaaccacgacggcgaa
tactcaatttcggtttcagaaaccacaacccgtgcagacgttgccgagctatttgatatt
gtactaggtgaaggccacggcctaagcgtagacagtattgcagccgatattgaagcaaac
ggtagcgactctattccagcgagtttagttcgtgatgacgaagtattaacgcatccaaac
tttaacagctaccacagcgaaacagacatgcttcgctacattaagcgccttgaaaacaaa
gatttagcgcttaaccactcaatgatttcgttaggttcatgcaccatgaaactaaacgcg
accgctgagatgatcccagttacatggcctgagtttgcaaaccttcacccattctgcccg
ctagaccaagcagaaggttatcaaataatgattaacgagctacacgactggctagttaac
attacgggttacgatgcggtttcacttcagccaaactcgggtgcacaaggtgaatacgca
ggcttaattgccattcgtaaataccacgagtcacgaggggatgcacaccgtaacgtatgt
ttaattccaagctcagcgcatggtactaacccagcgtcggcacaaatggcgagcatgaaa
attgtggtggttaactgtgataaaaacggcaacatcgacatgcaagacttaaaagcgaaa
gctgaagacgtgtctgaaaacctgtcgtgtgccatgatcacatacccatctacccacggt
gtttacgaagaaaccattcgtgaactatgtgacattattcatgagcacggcggccaagtt
tacatggacggcgcaaacatgaacgcgcaagtgggtgtaacaagcccgggctttattggc
tcagacgtatcgcacttaaacttgcacaaaacgttttgtattccacacggtggcggcggc
ccaggtgtaggcccaattggtgttaaatcgcaccttgcgccatttatgccaaaccacagc
gtaattaacgtaccaggtacaaacattaacaacggtgccgtatcggcagcgccttacggc
tcagccgctattttacctatttcatgggcgtacattgccatgatgggctcagagggctta
aaacaagccacagaaatggccattgtgaacgctaactacttaacgcaagagttaagccag
cacttcccaattttataccgtggccgtaacaatcgtgttgctcacgaatgtattgttgat
ttacgcccattaaaagaagcgtcaggcattactgaaatggacgtcgctaagcgcctacaa
gactacggcttccattcacccactatgtcgttcccagtagcgggcacgttaatgattgag
ccaactgagtctgagtctaagggcgagatagaccgctttatcgaagcaatggtctctatc
aaaggcgaaatcgacaaagtaatctctggcgaatggtcaatcgaaaacaacccacttgtg
tttgcaccgcatacacaagctgacgtacttggtaacgaatgggaccgcgcgtatgaccgt
ttttacgctgcattcccagtgccttcggtagctaaagacaagttctggccaactgttaca
cgtatagatgacgtatacggcgaccgtaacttagtatgttcatgcccagcggttgagact
taccgcgactaa
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