Pseudoalteromonas sp. PS1M3: PS1M3_07850
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Entry
PS1M3_07850 CDS
T11044
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psps Pseudoalteromonas sp. PS1M3
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psps03400
]
PS1M3_07850
Enzymes [BR:
psps01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PS1M3_07850
DNA repair and recombination proteins [BR:
psps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PS1M3_07850
Prokaryotic type
PS1M3_07850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBW90698
LinkDB
All DBs
Position
1:complement(871885..873414)
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AA seq
509 aa
AA seq
DB search
MREKINIVWFKRDLRLSDHQPLKSAFDTGLPTLLMYNFEPLLLEDAHYNERHWRFVYQSI
VDLNSQLARFNAKVYIFNENMQTLLQRLNKQFEISYIFSHQEIGLNNTFERDLAIKAWCH
HNHINWQESPTGAVIRGKKNRDNWNERWQKTMQAPLAIPNWKNVNSVKLKNYKNPELSET
YTQDDDNFQQGGPLHAREVLQSFFTQRGKGYQKGISSPSLSRTHCSRLSPYLAWGNISLR
QVYQTAIDAYHSNHPDKKGWKRPLAAFVSRLHWHCHFMQKFESECTMEFKALNPGYHSFP
YRTDKHVKHDIERWAQGQTGVPIIDACMRCLKATGYINFRMRAMLVSFVTHHLNISWQQA
SFPLANYFLDFEPGIHYPQIQMQASVTGINTIRHYNPIKQSEDQDPTGAFIKKWCPELEK
LPIEYLHEPWEQTPMEALFNDFKLGEDYPEPMLDLTLASKDARERLWQYRDRPEVKRAIG
KILRKHVAITPNTSKVKNKNTAKNNTKVK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaaaaataaatatagtgtggtttaaacgcgatttacgcttaagcgatcatcag
ccattaaaaagtgcgtttgatactggcctacctaccttactaatgtacaactttgaacca
cttctgctggaggatgctcattataatgaacgacactggcgctttgtgtaccagtctatt
gttgatttaaactctcaattagcgcgctttaatgcaaaggtgtatatatttaacgagaac
atgcaaactctgcttcaaaggcttaataagcagtttgaaatatcatatatttttagccac
caagaaatagggctaaataatacctttgaacgcgatttagcaattaaagcttggtgccac
cataaccatattaactggcaagagtcgccaacaggcgctgttattcgtggtaaaaaaaac
cgtgacaattggaacgaacgctggcaaaaaacaatgcaggctccgcttgctatacccaat
tggaagaatgttaattccgtcaaacttaaaaattataaaaatccagaattatctgaaaca
tacactcaagatgatgacaattttcagcagggcggcccgcttcatgcaagagaagttttg
caaagtttttttactcaacgcggtaaaggctatcaaaaaggaatatctagccctagctta
agccgcacccattgctctagactatcgccatatttagcatggggaaatataagccttagg
caagtttatcaaactgcgatagacgcttatcattcaaaccatcccgataaaaaaggttgg
aagcgcccgcttgctgcttttgtatctcgtttgcattggcattgccactttatgcaaaaa
tttgaaagcgaatgcactatggagtttaaagcattaaatccgggctatcattcatttccg
tatcgtaccgataaacatgtaaagcatgatattgagcgttgggcgcaggggcaaacaggc
gtgcctataatagatgcatgcatgcgctgtttaaaggccaccggttatattaactttaga
atgcgcgctatgttggtgagctttgtaacacaccatttaaatataagctggcagcaagca
agctttccattagctaattattttttagactttgaaccaggtattcattatccgcaaatt
caaatgcaggcatcggttacgggtattaataccattcgccattacaacccgataaaacaa
tcagaagatcaggacccaacaggcgcctttataaaaaagtggtgccctgaacttgaaaag
ctccctattgaatatttacacgagccgtgggagcaaacaccaatggaagcgctttttaac
gattttaaactgggtgaagattaccccgagcctatgcttgatttaacactcgcctcaaaa
gacgcccgcgagcgattatggcaataccgagatcgtcctgaagttaaacgtgccatagga
aaaatacttagaaagcatgttgcaatcacacctaacacaagcaaagtaaaaaataaaaac
accgctaaaaataacactaaggttaagtaa
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