Pseudoalteromonas sp. PS1M3: PS1M3_09060
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Entry
PS1M3_09060 CDS
T11044
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psps Pseudoalteromonas sp. PS1M3
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psps03016
]
PS1M3_09060 (truA)
Enzymes [BR:
psps01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PS1M3_09060 (truA)
Transfer RNA biogenesis [BR:
psps03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PS1M3_09060 (truA)
Prokaryotic type
PS1M3_09060 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Mucin2_WxxW
Motif
Other DBs
NCBI-ProteinID:
BBW90819
LinkDB
All DBs
Position
1:1006606..1007400
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AA seq
264 aa
AA seq
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MRVALGVEYNGARYSGWQRQSHVNSVQQEVEKALSSICNHPVEIVCAGRTDAGVHGTGQV
VHFETNASREMVAFTMGMNTLLPKDIAIRFAQPVAEDFHARFSATARRYRYVIYNYPYRG
AVMNEGVTHFHHKLDEKVMQEACQHLIGEHDFTSFRALHCQANTAKRTIHHLSVQRQGDY
VVIDIKANAFLHHMVRNITGCLMDIGLHKHQPVWLKELLDLKERAKASATAKAAGLYLVD
VDYPEQFNIPKTPLGPLFLPDVDI
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtagcacttggggttgaatataatggcgcacgttatagtggttggcagcgtcaa
tcgcacgtaaatagcgtacaacaagaagtagaaaaggcgctgtcgagtatctgtaaccac
ccagttgaaattgtgtgtgcagggcgaactgacgcaggagtgcatggaacaggccaagtt
gttcattttgaaaccaatgcatctcgtgaaatggtcgcgtttactatgggtatgaacact
ttgctacctaaagatattgctattcgatttgctcaacctgttgcagaagactttcatgca
cgttttagtgcaaccgcaagaaggtatcgctacgttatttataactatccataccgtgga
gctgttatgaacgagggtgttactcatttccatcacaagctagatgaaaaggtaatgcaa
gaggcgtgtcagcatttaattggtgagcatgactttacatcattcagagcattacactgc
caagctaataccgctaaacgtacaattcatcacttatctgttcagcgccaaggtgattac
gttgtaattgatattaaggcgaatgcatttttgcatcatatggtgcgcaatataaccggt
tgcttaatggatattggcttacacaagcaccaacctgtatggctaaaagagctattagat
ttaaaagagcgtgcaaaagcgagtgcaacagctaaagccgctggtttgtatttagtcgat
gttgattacccagagcagtttaatattcctaaaaccccactagggccattatttttacct
gatgttgatatttag
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