Pseudoalteromonas sp. PS1M3: PS1M3_15120
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Entry
PS1M3_15120 CDS
T11044
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psps Pseudoalteromonas sp. PS1M3
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psps03032
]
PS1M3_15120 (gyrA)
03400 DNA repair and recombination proteins [BR:
psps03400
]
PS1M3_15120 (gyrA)
Enzymes [BR:
psps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PS1M3_15120 (gyrA)
DNA replication proteins [BR:
psps03032
]
Prokaryotic type
DNA Topoisomerases
PS1M3_15120 (gyrA)
DNA repair and recombination proteins [BR:
psps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PS1M3_15120 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BBW91425
LinkDB
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Position
1:1684306..1687005
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AA seq
899 aa
AA seq
DB search
MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLALIVNPDLTITELMDYIPGPDFPTAAIINGKKGIEQAYQTGRGKV
YMRARADIETDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG
MRIVIEIKRGDVGEVILNNLYAQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFIIHRRE
VVTRRTVFDLRKARDRAHMLEGLAIALANIDPIIELIRKSPTPAEAKIALTARSWELGNV
KAMLEKAGEANVARPDWLADDLGIRDGQYFISEQQAQAILDLRLHKLTGLEHEKILSEYQ
TLLDLIAELLHILASPERLMEVIRDELVEIKAQYGDERRTEINAAAHDISLEDLITEENV
VVTLSHEGYVKYQALSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCFSTAGRL
YWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPVREYEEDKYIFMATAFGTVKKTP
LTAYSRQRASGIIAVNLNEGDSLIGVDITDGTNEIMLFTDAGKVVRFKEAEESAVVDENG
NPVLDEEGNPEIRFKGVRPMGRTATGVRGIKMTDEQRVVSLIVPKTDGAILTVTENGYGK
RTQLEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMLISNRGTLVRTRVNEVST
VGRNTQGVILIRTIDEEQVVGLQRIEEIEVTESDLINTEDVETVDTVIDEVVDDNPPSE
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctcgccaatgaaattctgccagtcaatattgaagacgagttaaaaaactcc
tacttagattacgcaatgagtgtaattgtaggacgtgcattaccagacgtacgtgatggc
ttaaagccagttcaccgccgcgttttgtttgcaatgaacgagcttagtaatgattggaac
aagccttacaaaaagtcggcacgtgttgtcggtgatgtaatcggtaaataccacccacac
ggcgatagcgcagtttatgacacgatagttcgtatggcacagccattctcacttcgttat
atgcttgtagacggccagggtaactttggttctgttgatggtgattcagctgctgctatg
cgttacaccgaagtacgtatggctaaaatgtctcatgagttattagcggatcttgagaaa
gaaacggttgatttcgttcctaactacgatggcacagagcaaattcctgatgttttacca
accaaggtacctaatttacttgtaaatggttcttctggtattgccgtaggtatggcgaca
aacatcccaccacataacttaactgaagttatcaatggttgtttagcattaattgttaat
ccagatttaaccataactgagttaatggattacattcctggtccagatttccctacagcc
gcaatcattaacggtaaaaaagggattgaacaagcgtaccaaacgggtcgtggcaaggtg
tacatgcgtgcacgcgctgacatcgaaacagacgaaaaaacgggtcgtgaaacaattatt
gttcatgaaatcccttatcaagttaacaaagcgcgcttaattgaaaaaatagcggagctt
gttaaagataaaaaaattgaaggcattagtgcactacgtgatgaatcagataaagacggt
atgcgtatcgttattgagataaagcgtggtgacgtaggtgaagtgattctaaacaaccta
tatgcacaaacacagttacaaacagtgtttggtatgaacatggttgcactcatcaataat
cagcctaagtgttttaatttaaaagaaatgcttgaagagtttattattcaccgtcgtgaa
gtagtaactcgtcgtacagtatttgatttacgtaaagcgcgcgaccgtgcacacatgcta
gaaggtctagcaattgcacttgccaacattgacccaattattgaacttattcgtaaatct
ccaacacctgcagaagcaaaaatagcgttaactgcacgttcgtgggaattaggtaatgtt
aaagcaatgcttgaaaaagcaggtgaggctaacgttgctcgcccagattggttagctgat
gatttaggtatacgcgacggccaatactttatttctgagcaacaagctcaagcgattctt
gacttacgattacacaagctaacaggccttgagcacgaaaaaatcttaagtgaataccaa
acactgcttgatttaattgctgaactgttacacatactggcaagcccagagcgcttaatg
gaagtaattcgtgacgagttagttgaaattaaggcgcaatatggtgatgagcgccgcact
gaaatcaacgcagccgcgcatgatatcagccttgaagatctaataactgaagaaaacgta
gttgttacgctttctcacgaaggctatgttaagtatcaggcgttgtctgattacgaagcg
cagcgtcgtggtggtaaaggtaaatctgcaacaaaaatgaaagacgaagattttattgag
cgtttattagttgcaaacacgcatgatactattttatgtttctctacagcagggcgttta
tattggttaaaagtatatcaattaccactagcaagtcgtgcagcacgcggtaagccaatt
gtaaacttattacctttagaagctgacgaacgtattaccgctattttgccagtacgtgag
tacgaagaagataaatacatctttatggcaacagcatttggtacagtgaagaaaacacct
ttaacagcctacagccgtcaacgtgctagcggtattattgccgttaacctaaatgagggt
gatagcttaattggtgttgatattactgatggtaccaacgaaataatgttgtttaccgat
gcgggtaaggttgttcgctttaaagaagctgaagaatctgctgttgttgatgaaaatgga
aacccagtattagacgaagaaggtaacccagaaattcgtttcaagggtgttcgtccaatg
ggcagaacggcaacgggtgtacgcggtattaaaatgaccgacgagcaacgtgttgtatcg
ctcatcgtgccaaaaactgatggcgcaatattgactgtaactgaaaatggttatggtaaa
cgaactcaacttgaagattacccatctaagagtcgtgcaacacaaggtgttgtatcaatt
aaggtgagtgagcgtaatggtgctgtagtaggtgctgttcaagttgatgacaacgacgaa
ataatgcttatttcaaatcgcggaacgttagtgcgtactcgtgtgaacgaagtttcaacg
gttggtcgtaacacacaaggtgttattttgatcagaactattgacgaagagcaagtagtt
ggtttacaacgtatagaagaaattgaagttacagaaagtgacttaattaatactgaagac
gttgaaacagtagatacagttatagatgaagtcgtggatgataatcctccttcagaataa
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