Pseudoalteromonas sp. PS1M3: PS1M3_15280
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Entry
PS1M3_15280 CDS
T11044
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psps Pseudoalteromonas sp. PS1M3
Pathway
psps03030
DNA replication
psps03430
Mismatch repair
psps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PS1M3_15280
03430 Mismatch repair
PS1M3_15280
03440 Homologous recombination
PS1M3_15280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psps03032
]
PS1M3_15280
03400 DNA repair and recombination proteins [BR:
psps03400
]
PS1M3_15280
Enzymes [BR:
psps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PS1M3_15280
DNA replication proteins [BR:
psps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PS1M3_15280
DNA repair and recombination proteins [BR:
psps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PS1M3_15280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
RTC
Motif
Other DBs
NCBI-ProteinID:
BBW91441
LinkDB
All DBs
Position
1:1704855..1705559
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AA seq
234 aa
AA seq
DB search
MFFKEVKNWNTRYAQLADDAQNNLLKEFYLSTFSDASASVKDIPFVALDFETTGLNSKTD
DIVSVGLVPFTLARIYCKQSKHWVVQPRRNLSESSIVIHGITHNDVDNAPDFDNIIAPLL
DALRSKVIVVHYAAIERGFFNSALLLRLKEHIEFMVVDTMELERRALKAKQGLIGQIFNT
KLGSLRLNDCRKRYSLPGYEGHHALTDALATAELLQAQLRHHYTEETPLFTIWS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcaaagaagttaaaaactggaatacacgttatgctcagcttgccgatgatgcg
caaaacaacttactaaaagagttttatttatctacatttagtgatgctagcgcttctgta
aaagacattccttttgttgcattagattttgaaacaacagggcttaatagtaaaacagat
gatattgtgagtgtagggttagtgccattcacattggcgcgaatatactgtaaacagagt
aaacattgggtggttcagccaagacgaaacctaagtgaatcatctattgtgatccacggt
attactcataacgatgttgataacgcgcctgactttgacaacattatagcccctttactt
gatgctttgcgttctaaggtaatagttgttcactatgcggcaatagaacgtggctttttt
aatagtgcgttattattgagattaaaagagcatattgagtttatggttgtagataccatg
gaacttgagcgaagagcgctcaaagcaaaacaaggcttaatagggcagatatttaacact
aaactgggatcgctaaggctaaatgactgtcgtaaacgttattctctacctggttatgaa
ggacatcatgcgttaaccgatgcgcttgcaaccgctgagcttttacaagctcaattgcgt
catcattacacagaagaaacaccgttgttcactatatggagctga
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