Pseudoalteromonas sp. PS1M3: PS1M3_17490
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Entry
PS1M3_17490 CDS
T11044
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
psps Pseudoalteromonas sp. PS1M3
Pathway
psps00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PS1M3_17490 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psps01007
]
PS1M3_17490 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psps03016
]
PS1M3_17490 (serS)
Enzymes [BR:
psps01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
PS1M3_17490 (serS)
Amino acid related enzymes [BR:
psps01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PS1M3_17490 (serS)
Transfer RNA biogenesis [BR:
psps03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PS1M3_17490 (serS)
Prokaryotic type
PS1M3_17490 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
BBW91662
LinkDB
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Position
1:complement(1939896..1941200)
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AA seq
434 aa
AA seq
DB search
MLDSKYLRQDVEQTAARLAARGYELDVAKVTELEEQRKTLQVKTQELQSQRNASAKAIGQ
AKAKGEDAQPLLDAVANLGSELDATKKAQDEVLNAINDIALAIPNLPDESVPEGADEDDN
VEILTWGTPKKYDFEVKDHVDVGQDLNGLDFEMGVKISGARFTVMRGQVARMHRALTQYM
LDTHTDTNGYTEMYVPYLVNSASLYGTSQLPKFAGDLFHTLGLVNDDGEQQAGFSLIPTA
EVPLTNSARDEIYDESDLPIRLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKP
EDSMQALEELTGHAEQILQALELPYRKVILCMGDMGFGAAKTYDLEVWLPAQDTYREISS
CSNMVDFQARRMQARFRREGAKKPELLHTLNGSGLAVGRTLVAILENYQQADGSVVVPEV
LRPYMGGLEVIGKA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgttagattctaaatatttacgacaagacgttgagcaaactgcagcacgcttagcggct
cgtggctacgagcttgatgttgcaaaagtgacagaacttgaagagcaacgcaaaacatta
caagtaaaaacgcaagagcttcaaagtcaacgtaacgccagtgctaaagccattggccaa
gcaaaagcgaaaggcgaagacgcacagccgctattagacgcagtggcaaatttaggcagc
gaattagacgcaactaaaaaagcgcaagacgaagtactcaacgcgattaacgacattgct
ttagcaattccaaatttaccagacgaatcagtaccagaaggcgctgatgaagacgacaac
gttgaaatacttacctggggcacgcctaaaaagtacgactttgaagtaaaagatcacgta
gatgtagggcaagacctaaacggcctagattttgaaatgggcgttaaaattagtggcgca
cgttttacagtaatgcgcggccaagtagcacgtatgcaccgtgcactaacgcaatacatg
ctagacacccacacagacacaaacggctatacagaaatgtatgtaccgtacttagtaaac
agcgcaagcctatacggcacaagccaattacctaagtttgcaggcgacttattccataca
ttaggcctagtaaacgacgacggtgaacaacaagctggctttagcttaatccctacagca
gaagtaccgttgactaacagcgcacgcgacgagatttacgacgaaagcgatttaccgatt
cgcttaactgcgcacacaccgtgttttagaagtgaagcgggcagctacggtcgcgataca
cgcggcttaattcgccagcatcagtttgataaagttgaactagtacaactagttaaacca
gaagattcaatgcaagcgcttgaagagctaacaggccacgcagagcaaattttacaagca
ttagaactaccataccgtaaagtaattttatgtatgggcgacatgggctttggcgcagct
aaaacatacgacttagaagtatggttaccggcacaagatacctaccgtgaaatttcatct
tgttcaaacatggttgatttccaagcgcgccgtatgcaagcacgttttcgccgtgaaggg
gctaaaaaaccagagttactacatacactaaatggctcaggtttagccgttggccgtaca
ctagttgccatactagaaaactaccaacaagccgatggttcagtagtagtaccagaagta
ttacgcccatacatgggtggacttgaagtgattggtaaagcgtaa
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