Pseudoalteromonas sp. PS1M3: PS1M3_21430
Help
Entry
PS1M3_21430 CDS
T11044
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
psps Pseudoalteromonas sp. PS1M3
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psps03400
]
PS1M3_21430
Enzymes [BR:
psps01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PS1M3_21430
DNA repair and recombination proteins [BR:
psps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PS1M3_21430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF2380
Motif
Other DBs
NCBI-ProteinID:
BBW92056
LinkDB
All DBs
Position
1:2367910..2369466
Genome browser
AA seq
518 aa
AA seq
DB search
MATYKTLRLILGDQLNPSHSWFKSKEDGVLYLIAELKQETNYVKHHVQKLCAFFNAMENF
ATALKSAGFNVLHLTLDDTHEDKHLPALLNRVAKEYNCSCIEYLYPDEFRLKSQLADFEQ
SSEINVSAYDSEHFLLPFNDIKDRFKKDKHVTMEHFYRAMRKRYDLLMEDDKPAGGKWNY
DSNNRNKFSKQDLKSIPEPKLFKNDVSHILARLKKHNIAYFGEIKEGKLEWSTSRKQAKE
SLEYFCEHLLVNFGKFQDAMTDQSKDNTSLYHSRLSFALNTKLLHPLYVIKRVISEFEQR
PDEISLSQVEGFTRQILGWREYVRAVYWVNMPDYATKNQLKANNKLPQYFWDGNTKMNCL
SHSLKQSLDTAYAHHIQRLMIIGNFCLLSGINPDEVDNWYLGVYIDAIEWVEMPNTRGMS
QFADDGIIATKPYTASGNYVNKMSDYCKNCQYDVKQKVGDKACPLNSLYWRFMQTHREKL
EKNPRIGMVYRNWDKQSDDLREDTLNQATHYINNIESL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttacaaaaccctaagactcattttaggcgatcaactcaatccttctcattct
tggtttaaaagtaaagaggacggtgttctctaccttatcgcagaattaaaacaagaaacc
aattacgttaaacaccatgtgcaaaagctttgtgctttttttaatgcgatggaaaacttt
gcaactgcgttaaaatctgcaggtttcaatgtattgcacttaaccctagacgacacacac
gaagataaacacctacccgcactactaaatcgtgttgctaaggaatataactgctcctgc
atagaatacttatacccagacgaatttaggttaaaatcgcaattagctgattttgaacaa
tcatccgaaataaatgtatcagcatatgactcagagcattttttactgccctttaacgat
attaaagatcgattcaagaaagataagcatgtgaccatggagcacttttatcgtgctatg
cgtaaacgatatgatttattaatggaggacgataaaccagctggcggtaaatggaactac
gacagtaataaccgcaataaattctctaagcaagacttaaaatctatcccagagcctaaa
ttatttaaaaacgatgtaagtcatatcctcgctcgtttaaaaaaacacaacatcgcttac
tttggagaaattaaagaaggaaaacttgaatggtctacgtcacgtaagcaagccaaagaa
tctcttgaatacttttgtgagcatttacttgtcaattttggtaagtttcaggatgcaatg
acagaccaaagtaaagacaatactagtctttaccatagcaggctctcttttgccctaaac
actaaacttcttcaccccttgtatgtaatcaaacgtgtaatatctgaattcgagcaacgg
cctgacgaaatatctctttcacaagttgaagggtttaccagacaaatactcggttggcga
gaatacgttcgtgctgtttattgggtaaacatgcccgactacgcgactaaaaatcaacta
aaagccaataataagctccctcaatatttttgggatggtaatacaaaaatgaactgtttg
agccactcattaaagcaaagcttagatactgcctacgctcatcatatacagcgcttgatg
atcattggtaacttttgtttactcagcggaataaaccctgacgaagttgataactggtac
ttaggtgtctatatagatgccattgagtgggttgaaatgcctaacacacgtggaatgagc
caatttgcagacgatggaattattgccactaaaccctatactgcaagtggtaattacgtc
aataaaatgagcgactattgcaaaaattgtcaatacgacgtgaaacaaaaagtgggggat
aaagcttgcccactgaacagtttatattggcgttttatgcaaacacaccgcgaaaaacta
gagaaaaacccacgaataggcatggtttatagaaattgggataagcaaagcgatgattta
cgcgaagacacacttaatcaagctacacactacataaataacattgagtctttatga
DBGET
integrated database retrieval system
