Pseudoalteromonas sp. PS1M3: PS1M3_22960
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Entry
PS1M3_22960 CDS
T11044
Symbol
flrC
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
psps Pseudoalteromonas sp. PS1M3
Pathway
psps02020
Two-component system
psps02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PS1M3_22960 (flrC)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PS1M3_22960 (flrC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psps02022
]
PS1M3_22960 (flrC)
02035 Bacterial motility proteins [BR:
psps02035
]
PS1M3_22960 (flrC)
Two-component system [BR:
psps02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
PS1M3_22960 (flrC)
Bacterial motility proteins [BR:
psps02035
]
Flagellar system
Flagellar assembly proteins
Others
PS1M3_22960 (flrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
AAA
AAA_16
FleQ
DUF2089
MerR
MFD_D3
HTH_20
AAA_19
MCM
AAA_3
HTH_24
HTH_23
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BBW92209
LinkDB
All DBs
Position
1:complement(2530157..2531623)
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AA seq
488 aa
AA seq
DB search
MSNTILVVEDDAGLREALIDTLEMSGIECIAANCAEQAMLLLKKEQFSLVVSDVQMGTMS
GLDLLRSIKLNHPELPVLMMTAYATIDDAVEAMRLGAIDYMAKPFAPEVLLNMVSRYLPE
KAKETDGPIVADPSSIQLLELASKVARSDASVMVLGPSGSGKEVLARYIHDKSNRCDAPF
VAINCAAIPENMLEATLFGYEKGAFTGAIQACPGKFEQAQGGTILLDEITEMDLGLQAKL
LRVLQEREVERLGGRKTIQLDVRILATSNRDLKEAVTENQFREDLYYRLNVFPLMWRPLC
QRPGDILVLAKHLIERHLNKSKEPMAYLDSAAEKKLLAHSWPGNVRELDNVIQRALILRT
GDTLNEHAIFIENIAATDFVMEPASVSAQHTTQQQIGVTNKDIDQGAMSSAYYDEQSSPA
EPTKQDLLAVDTGSYKDELKDKEHRIILETLARCQGKRKDVAETLGISPRTLRYKLAQMR
DLGISLPA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacactattttagttgtcgaagatgatgcagggcttcgcgaagccttaattgac
acactcgaaatgtcggggattgaatgtattgcggctaattgtgcagagcaagccatgtta
ttgctaaaaaaagagcaattttcgctggtggtgagtgatgtacaaatgggcactatgagt
gggcttgatttactacgcagtattaagcttaaccaccctgaattgcctgttttaatgatg
acggcgtacgctaccattgacgatgctgttgaagcgatgcgcttgggcgctattgattac
atggcaaagccgtttgcacctgaagttttactcaatatggtaagtcgatacttacctgaa
aaagcaaaagagaccgacggccccattgttgccgacccaagcagtattcaacttttagag
ttagcaagtaaagttgcacgctctgatgcgagcgttatggtgctaggcccaagtggttca
ggtaaggaagtgcttgcacggtatattcatgataaatcgaaccgatgcgatgcgccgttt
gttgcgattaactgtgcagcaattcctgaaaatatgcttgaagcaaccttatttgggtat
gaaaaaggcgcgtttacaggcgcaattcaagcgtgtcctggtaagtttgagcaagcgcaa
ggcggtactatattgctcgacgaaataacagaaatggatttagggctgcaagctaaacta
cttcgtgtgttgcaagagcgcgaagtagagcgcttaggtggaagaaaaacaatccagtta
gatgtacgtatacttgcaacaagtaaccgcgatttgaaagaagcggttaccgaaaaccaa
tttagagaagatttatattacaggcttaatgtgtttcctttgatgtggcgaccactttgt
cagcgacctggagatatccttgtattggctaagcatttaattgagcgccacttaaacaaa
agtaaagagcctatggcttatcttgatagtgccgcagagaaaaaattacttgctcattca
tggcctggtaatgtgcgtgagcttgataacgtaatacaacgtgcgttaatacttaggact
ggggatactctaaacgagcatgctattttcattgaaaacatagcggcgacagattttgta
atggagcctgcatctgtcagcgcgcaacatactactcagcaacaaataggtgttactaat
aaagatattgaccaaggagctatgagttcagcttattatgacgaacagtcatctccagct
gagccaacaaaacaagacttattggctgttgatacgggaagctataaggatgagctaaaa
gataaagaacatcgtattattttagaaacgttagcaagatgccaaggtaagcgaaaagat
gtcgctgaaacgctaggtataagccctcggactttacgttacaaactagcgcagatgcgc
gatttaggtatttcactccccgcataa
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