Pseudoalteromonas sp. PS1M3: PS1M3_22990
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Entry
PS1M3_22990 CDS
T11044
Symbol
flrA
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
psps Pseudoalteromonas sp. PS1M3
Pathway
psps02020
Two-component system
psps02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PS1M3_22990 (flrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
PS1M3_22990 (flrA)
02025 Biofilm formation - Pseudomonas aeruginosa
PS1M3_22990 (flrA)
09142 Cell motility
02040 Flagellar assembly
PS1M3_22990 (flrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psps03000
]
PS1M3_22990 (flrA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psps02035
]
PS1M3_22990 (flrA)
Transcription factors [BR:
psps03000
]
Prokaryotic type
Helix-turn-helix
Other families
PS1M3_22990 (flrA)
Bacterial motility proteins [BR:
psps02035
]
Flagellar system
Flagellar assembly proteins
Others
PS1M3_22990 (flrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
Mg_chelatase
AAA_16
AAA_7
AAA
MCM
TIP49
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
BBW92212
LinkDB
All DBs
Position
1:complement(2533647..2535083)
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AA seq
478 aa
AA seq
DB search
MILILDNNNNRSIGLNASLGFIGEVTHRLDEDNFEQECAKYQQHECMVILGALKSLDHEN
LIKRYPTLPFLLIGETLRPLLSIANVVGLICEPFNHEVTTQLLHDCQQYHRMLPGEHKNT
QPHKSFDGLVGETQAVKEVRFLIEQVAKTDANVLILGESGTGKEVVARNVHLLSKRSTGP
FVPVNCGAIPAELLESELFGHEKGAFTGAISARKGRFELAQGGTLFLDEIGDMPLQMQVK
LLRVLQERSYERVGGTKAIQADVRVIAATHRNLETMIEAGSFREDLYYRLNVFPIENPSL
SERADDIPLLLKELMRRVNEQTGTTAKFTERAIESLKEHAWPGNIRELANLVERMVIMFP
EKVVDIPDLPNKYRYIEVDAYEPEYPEELMEKDAFNDIFSTGFSDYENEPEAEFNSNASG
LLPEDGIELKEYLAELEISLITQALERYDYVVARAAEILGVRRTTLVEKMKKYNLSRD
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgattttagataataataacaatcgctctattgggttaaacgcatcacttggt
tttatcggtgaggttactcatcgtttagatgaagacaactttgaacaagagtgtgcaaaa
tatcagcagcatgagtgcatggtcattttaggggcattaaagtctctcgatcacgaaaac
ttaattaagcgctacccaacacttccatttttattaataggtgaaacgttaagaccatta
cttagcattgctaatgtagttggacttatttgtgagccatttaatcacgaagtgaccaca
cagttgcttcatgattgccagcagtatcatcgtatgttgccgggggagcacaaaaatact
cagccacataaatcttttgatggccttgtaggtgaaacacaagctgtaaaagaggttcgc
tttttaattgaacaagtagcaaaaacagatgcaaacgttttaattttaggtgagtcaggt
actggtaaagaagtggttgcacgtaacgttcacttgctatctaaacgaagtacagggcca
tttgtgcctgtaaactgtggagctatacctgcagaactattagaaagtgaactttttggc
catgaaaaaggggcgtttacaggggctatttctgcgcgtaaaggccgttttgagttagcg
caaggcggtacgttgtttttagatgaaattggtgatatgccgctacaaatgcaggttaaa
cttttacgcgtattacaagaacgaagctacgagcgtgtaggtggcactaaggcgattcaa
gccgatgtacgtgttattgctgcaacacaccgcaacctcgaaaccatgattgaagcaggc
agctttcgtgaagatttatattaccggttaaatgtattccctatagagaacccgtcgtta
agtgagcgtgctgatgacattcctttactacttaaggagttaatgcgtcgcgtaaacgag
caaacgggcacgacagctaaatttactgagcgagcaatcgaaagtttaaaagagcatgca
tggccgggtaatatccgtgagcttgcgaatttggttgagcgcatggttataatgttccct
gaaaaggtagtggacatccctgatctacccaataaatatcgttacattgaggtagatgct
tatgaacctgaatatcctgaagaacttatggaaaaagatgcttttaacgatatattcagc
acagggtttagtgactatgaaaacgaacccgaggcagagtttaatagcaacgctagcggc
ttacttccggaagatggcattgagcttaaagagtatttagctgagcttgaaatcagccta
ataacccaagcattagaacgatatgattacgtggtggctcgggcagctgaaatactgggc
gtaagaagaacaacgctcgtagagaaaatgaaaaagtacaacctttcaagagattag
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