Pseudoalteromonas sp. PS1M3: PS1M3_24000
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Entry
PS1M3_24000 CDS
T11044
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psps Pseudoalteromonas sp. PS1M3
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psps03032
]
PS1M3_24000
03400 DNA repair and recombination proteins [BR:
psps03400
]
PS1M3_24000
Enzymes [BR:
psps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PS1M3_24000
DNA replication proteins [BR:
psps03032
]
Prokaryotic type
DNA Topoisomerases
PS1M3_24000
DNA repair and recombination proteins [BR:
psps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PS1M3_24000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Helicase_C_4
Motif
Other DBs
NCBI-ProteinID:
BBW92313
LinkDB
All DBs
Position
1:complement(2641710..2642687)
Genome browser
AA seq
325 aa
AA seq
DB search
MKLIYVDDNLPGITRKLKNKQWQYFDPIGKVIKDEAVIERLNGLAFPPAYKSAWFCPEEN
GHILATGFDSKGRKQYRYHPEFRAQQEAKKYQACGVFGHKLPLLRARLESDLQGSELNVE
RTLAAVVRLMDLGALRVGDERNVKQNKSFGATTLRTRHAKLTGKNIQLKYRAKSGKEREV
NITDRVLSHVIKDLQDLPGQHLFQYISEGERTNVTSSEINQYIQHIMGEEFSAKHFRTWR
ASVIAFKQLAKAKGVLTLKSMLGCVSQQLGNTPAIARKSYVHPDLITLCKEDEAAQNAWR
ESLTLPRKTKYLSRYERGFLAFLSD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaatttatgtggatgataatttacctggtatcactcgaaagcttaaaaacaag
caatggcagtatttcgatcctattggcaaagtaataaaagatgaagcggttattgagcgt
ttgaatggcttagcatttccgcctgcgtataaaagcgcatggttttgccccgaagaaaac
ggacatattttagcgacaggatttgacagtaaagggagaaaacaataccgataccaccca
gagtttagagcccagcaagaagccaaaaaataccaagcctgtggtgtatttggccataaa
cttcctttattaagagctcgcttggagtcagacttacaaggcagtgagttaaatgtagag
cgtacattagcggcggtagttaggcttatggacttaggggcacttagagtcggtgacgag
cgaaacgtaaaacaaaacaaaagctttggcgctacaaccttacgcacccgacacgcaaag
ctgactgggaaaaatattcagttaaaataccgagctaaatctggaaaagagcgtgaggtc
aacattactgacagagtactaagccatgtaattaaagacttacaagatttacctgggcaa
catctatttcagtatataagtgaaggtgagcgcactaacgtaacatcgagcgaaataaac
caatatatacagcacataatgggggaggagtttagtgcaaaacattttagaacctggcga
gcaagcgttattgcttttaagcagctagctaaagccaaaggcgtacttaccttaaaaagc
atgctcggttgtgtatctcagcaattaggtaataccccagcaatagcacgcaaatcttat
gttcaccctgatttaattacactgtgtaaagaagatgaagcagctcaaaatgcgtggcgt
gagtcacttacgttacctcgcaagactaagtatttaagcagatacgaacgtggtttttta
gcgtttttaagcgattaa
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