Pseudoalteromonas sp. PS1M3: PS1M3_26890
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Entry
PS1M3_26890 CDS
T11044
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psps Pseudoalteromonas sp. PS1M3
Pathway
psps03410
Base excision repair
psps03430
Mismatch repair
psps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PS1M3_26890 (recJ)
03430 Mismatch repair
PS1M3_26890 (recJ)
03440 Homologous recombination
PS1M3_26890 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psps03400
]
PS1M3_26890 (recJ)
DNA repair and recombination proteins [BR:
psps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PS1M3_26890 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PS1M3_26890 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PS1M3_26890 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
BBW92602
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Position
1:complement(2950056..2951777)
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AA seq
573 aa
AA seq
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MKKLIIARENVNDSHLPSHLHPVIKQIYATRRVVDAQELDNGVATLHDYKLFKDIDKASA
LLVDALKAQSHILIVGDFDADGATSTATLMQGLQMFGFQNLDYLIPDRFSLGYGLSPALA
EQIVQIKPDLVITVDNGISCIAGIDILKSVGIKVLVTDHHLQGEQLPNADAIVNPNRHEC
NFPSKSIAGVGVAFYLLIALRSLMREQGYFTQQTPPNLANLLDIVALGTVADVVALDANN
RTLVHQGLARIRSGKTRPGITALIEVANRNAARLSASDFGFSLAPRLNAAGRLDDMSLGI
ACLLSNDINQARRIASELDSLNHARREIEQGMQAEAQAVLDRLAFTDDNIPDAICLFQDD
WHQGVIGILAGRLKEKYHRPTVIFAGGENGEIKGSCRSIEGLHMRDLLEGLNTATPHLIN
KFGGHAMAAGLSIDEQNFNDFKRAFDAAVSAQLSEESKRCIVFTDGELPNDCFTMEFAQL
LKQSGPWGQQFPEPVFEHTFELIQQRIVGEKHLKLVLKHQSGRLVDAIAFGIDVKEWPDT
EARFVKVAYQLDINEFRGKFSLQLIVRELEKVH
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgatcattgcgcgcgaaaacgttaacgactcgcacttaccgagtcatttg
catccggtaataaaacaaatttacgcgactcgtcgtgtggttgatgcccaagagctcgat
aacggtgttgctacgcttcacgattataaattgtttaaagacatcgacaaagcaagtgcg
ttactagtcgatgcgcttaaggcgcaaagccacattttaattgtgggcgactttgatgcc
gatggcgcaaccagtactgcaaccttaatgcaggggttgcaaatgtttggttttcaaaat
ttagattacctcattccagaccgctttagcttaggttatggcttaagccccgcactggcc
gaacaaatagtacaaataaagcccgatttagtgatcaccgtagataacggtatatcctgt
attgccggtattgatattttaaaatcggtaggtataaaagtgttggttacagatcaccat
ttacaaggtgaacagcttcccaatgccgatgccattgtaaatccaaacagacacgaatgt
aactttccgtcaaagtctattgctggtgtaggcgtagcgttttacttattaatagcacta
agaagcctaatgcgcgaacaaggttactttacgcaacaaacaccgcctaacttagcaaac
ttattagacatagttgcactgggtacagtcgctgatgtagttgcacttgatgcaaataac
cgaacattagtacaccaaggcttagcgcgtattcgcagtggcaaaacacgcccaggtatt
acagcacttattgaagtggccaacagaaatgcagcgcgtttaagcgccagcgattttggt
ttttcacttgcgccacgtttaaacgcagcagggcgactagacgacatgagtttgggcata
gcgtgtttactgagtaacgatataaaccaagcaaggcgtatcgcaagcgaactcgacagc
ttaaaccatgcaaggcgtgaaatagagcaaggtatgcaagctgaagcacaagctgtgctt
gataggctcgcctttaccgacgataacattcccgatgctatttgtttgtttcaagatgac
tggcaccaaggcgtaattggtattttggctggccgtttaaaagaaaagtaccaccgccca
accgttatttttgccggtggtgaaaatggcgaaattaaaggctcgtgccgctctattgaa
gggctgcatatgcgtgacctactcgaagggttaaataccgccacgccccatttaataaat
aagtttggtggccacgcaatggctgcgggtttaagcatagacgagcaaaattttaacgac
tttaaaagagcgtttgatgccgcagtcagtgcgcaattaagcgaagaaagtaagcgttgt
attgtatttaccgacggcgagctgccaaacgactgctttaccatggagtttgcccaatta
ttaaagcaatcaggcccatgggggcagcaatttccagagcctgtgtttgaacataccttt
gaattaattcagcaacgtattgttggtgaaaagcatttaaaactggtgcttaaacatcaa
tcagggcgattagttgacgctattgcttttggtatagacgtaaaagagtggccagatacc
gaagcacgctttgttaaagtggcttatcaacttgatataaacgagtttagaggtaaattt
agcttgcagctaattgtacgagagcttgaaaaagtgcactaa
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