Pseudoalteromonas sp. PS1M3: PS1M3_27020
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Entry
PS1M3_27020 CDS
T11044
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psps Pseudoalteromonas sp. PS1M3
Pathway
psps03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PS1M3_27020 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psps03400
]
PS1M3_27020 (ung)
Enzymes [BR:
psps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PS1M3_27020 (ung)
DNA repair and recombination proteins [BR:
psps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PS1M3_27020 (ung)
Prokaryotic type
PS1M3_27020 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
BESS
Motif
Other DBs
NCBI-ProteinID:
BBW92615
LinkDB
All DBs
Position
1:complement(2964091..2964753)
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AA seq
220 aa
AA seq
DB search
MSDWDTFLQNELQHPYMQQTLNAVENRRAEGIAVYPPEPYVFNAFNATPLNNIRVVILGQ
DPYHGEGQAHGLCFSVMPEVKKLPPSLKNMYKELATDIDGFVIPEHGYLQSWAEQGVFLL
NTVLTVEQGQAHSHKHLGWEQFTDNVIAHINEHCEGVVFILWGAHAQKKGKGIDSTRHSI
LSGPHPSPLSAHRGFFGCKHFSKTNELLLAQGKKPINWQV
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactgggatacatttttacaaaacgagctacagcacccttatatgcagcaaact
ttaaatgcagttgaaaaccgccgagcggaaggtattgctgtttaccctcccgagccatac
gtatttaatgcatttaatgccacgccgctaaacaatattagggtggtaattttagggcaa
gacccttaccacggcgaagggcaagctcatgggctgtgtttttctgttatgcccgaggta
aaaaaactcccaccctcgcttaaaaatatgtacaaagagctagctacagatattgatggc
tttgttattcctgagcatggttacttacaaagctgggcagaacaaggcgtgtttttacta
aatactgttttaacggtagagcaagggcaagcccattcccataaacatttaggttgggag
caatttaccgataatgttattgcgcacattaatgagcactgcgaaggtgtagtatttatt
ttatggggcgcacatgcgcaaaaaaaaggaaaaggcatagatagcactcgccactctatt
ttgagtgggccgcatccgtcgccgctgtctgctcaccgaggcttttttggttgtaagcac
ttttcaaaaactaacgaactgctgttagcacaaggtaaaaaacctataaattggcaggtt
tag
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