Pseudoalteromonas sp. PS1M3: PS1M3_27090
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Entry
PS1M3_27090 CDS
T11044
Symbol
hdtR
Name
(GenBank) LysR family transcriptional regulator
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
psps Pseudoalteromonas sp. PS1M3
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psps03000
]
PS1M3_27090 (hdtR)
Transcription factors [BR:
psps03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PS1M3_27090 (hdtR)
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Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BBW92622
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Position
1:complement(2970874..2971728)
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AA seq
284 aa
AA seq
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MDIDLLKTFVEVVRTRHFGKAAENLYITQSAVSFRIRQLEQGLGVNLFIRQRNNIQLTAP
GERLLPHAQMIITGMQRAKVDVALADNMHKQISLAGTPNIWDAFLQFGITNIVSAMPGVS
LVAEVKAQQESTRLLLERTLDLAILFDPPKVDELVVERICELPIIPVSGYDTATNENFFD
NQYVYVDWGTTFSLWHARQFTGKTPPYFRTSTGRIALDLILQCGGSAFIPHVLVEQHLEN
GELFHVKNVENTSRDIFVAYHRDNEQKELIETLINLLPTIKAHA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtggatatcgatttattaaaaacatttgttgaagtagtgcgcacgcgtcatttcggtaaa
gccgcagagaacctctatataacgcagtcggcggtcagttttcgtattcgtcaattagag
caagggcttggtgttaatttatttattcgccagcgtaataatattcaattaacagcgcct
ggtgaacggttgttgcctcatgcgcaaatgatcataactggtatgcagcgcgccaaagta
gatgtagcccttgctgataatatgcataaacaaattagcttggcagggacgcctaatatt
tgggatgcctttttgcagtttggtattactaatattgtgtcggctatgccgggagtctct
ttggttgctgaagttaaagcccagcaagaaagcacgcgattattgcttgagcgcacgctt
gatttagccattttatttgatccaccaaaagtagatgagttagttgttgagcgtatttgt
gaactgcctattattcctgtaagtgggtatgacactgcaacaaacgaaaacttttttgat
aatcagtacgtgtatgttgactggggaacgacattttcactttggcatgcacgccagttt
accggtaaaacgcctccatactttagaacaagcaccggacgaattgcgttagatttaata
ctacaatgtggtggtagcgcatttattccacatgttttggttgagcaacatttagaaaat
ggtgaattatttcatgtaaaaaatgtagaaaatacgtcaagagatatatttgtagcctac
catagagataacgaacaaaaggaactgatagaaacactcataaatttactacctactatt
aaggcacatgcttag
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