Pseudoalteromonas sp. PS1M3: PS1M3_28810
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Entry
PS1M3_28810 CDS
T11044
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
psps Pseudoalteromonas sp. PS1M3
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psps03021
]
PS1M3_28810 (rpoH)
Transcription machinery [BR:
psps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PS1M3_28810 (rpoH)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
Motif
Other DBs
NCBI-ProteinID:
BBW92794
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Position
1:complement(3148469..3149332)
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AA seq
287 aa
AA seq
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MSKDLYAMALTVGQQSASMDGYLQAVSTIPMLKVEEEQELAKKLQEEGDLSAAKQLIMSH
LRFVAHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPSVGVRLVSFAVHWIKAEIHEFV
LKNWRIVKVATTKAQRKLFFNLRKNKKRLGWFNQAEVSTVASELGVSEKEVREMESRMSG
QDMGFDLTGDDNDDAPTSTYSPVQYLTDGSADLADDIEQQQWQEQSHTRLFSALKTLDER
SQDIVSARWLSDDKATLQELAEKYSVSAERVRQLEKTAMKKLQSAMS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagatttatacgcaatggcacttacagttggacaacaaagcgcaagcatggat
ggctaccttcaagcggtcagcacaatccctatgcttaaagttgaagaagagcaagaactt
gctaaaaaacttcaggaagaaggcgatcttagtgctgcaaagcaactcattatgtcgcat
ttgcgctttgtagcgcacatagctaaaagctactcgggatacggcttgccacaagctgac
cttattcaagaaggcaatataggcctgatgaaagcggttaaacgtttcgacccaagcgtg
ggtgttcgtttagtatcgtttgcagtgcattggattaaagccgaaatacacgaatttgtt
cttaagaactggcgtatagttaaagtagctactacaaaagcacagcgtaaattgtttttt
aatcttcgtaaaaataaaaagcgtttaggctggtttaaccaagcagaggttagcactgtt
gctagtgagctgggtgtaagcgaaaaagaagtgcgtgaaatggaatctcgtatgagcggt
caagatatgggctttgacttaacgggtgatgataacgatgacgcaccaacaagcacttat
tcaccggtacaatatttaacggatggttctgctgatttagctgatgacattgagcagcaa
caatggcaagaacagtctcatactcgtttgtttagtgcacttaaaacactagatgaacgt
tcacaagacattgtaagtgcgcgctggttgtctgatgataaagcaacactgcaagagctt
gctgaaaaatacagtgtatctgctgagcgtgttcgccagcttgaaaaaacagcaatgaaa
aagttacaaagcgctatgagctga
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