Pseudoalteromonas sp. PS1M3: PS1M3_29830
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Entry
PS1M3_29830 CDS
T11044
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psps Pseudoalteromonas sp. PS1M3
Pathway
psps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PS1M3_29830 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psps03019
]
PS1M3_29830 (groEL)
03110 Chaperones and folding catalysts [BR:
psps03110
]
PS1M3_29830 (groEL)
03029 Mitochondrial biogenesis [BR:
psps03029
]
PS1M3_29830 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psps04147
]
PS1M3_29830 (groEL)
Enzymes [BR:
psps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PS1M3_29830 (groEL)
Messenger RNA biogenesis [BR:
psps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PS1M3_29830 (groEL)
Chaperones and folding catalysts [BR:
psps03110
]
Heat shock proteins
HSP60 / Chaperonin
PS1M3_29830 (groEL)
Mitochondrial biogenesis [BR:
psps03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PS1M3_29830 (groEL)
Exosome [BR:
psps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PS1M3_29830 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
PS1M3_29830 (groEL)
Exosomal proteins of breast cancer cells
PS1M3_29830 (groEL)
Exosomal proteins of colorectal cancer cells
PS1M3_29830 (groEL)
Exosomal proteins of bladder cancer cells
PS1M3_29830 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBW92896
LinkDB
All DBs
Position
1:3258661..3260310
Genome browser
AA seq
549 aa
AA seq
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MAAKEVLFAGDARAKMLTGVNILANAVKVTLGPKGRNVVLDKSFGSPVITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAIIAAVAELKALSVPCADTKAIAQVGTISANSDKEIGDIIAEAMEKVGRNTGVITVEE
GQSLENELDVVEGMQFDRGYLSPYFINNAEKGAVELDNPFILLVDKKVSNIRELLPTLEA
VAKASKPLLIIAEDLEGEALATLVVNNMRGIVKVSAVKAPGFGDRRKAMLQDIAVLTGGT
VISEEIGLELEKATVEDLGTAKRVVITKDDTTIIDGAGEEEGITGRVSQIKAQIEEATSD
YDKEKLQERMAKLAGGVAVIKVGAATEIEMKEKKDRVEDALHATRAAVEEGVVPGGGVAL
VRAASKLVELLGDNEDQNHGVKVALRAMEAPLRQIVTNAGDEASVVINAVKGGEGNYGYN
AATGEYNDMIEMGILDPTKVTRSALQFAGSIAGLMITTEAMVAEIPKEEAAGAPDMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtactttttgcaggtgacgcacgcgctaaaatgctaactggcgta
aacatcctagcaaacgcagttaaagttacattaggtcctaaaggccgtaacgttgtacta
gacaaatcgtttggctctccagtgatcactaaagatggtgtatctgtagcaaaagaaatc
gaacttgaagataagtttgaaaacatgggcgcgcaaatggttaaagaagttgcatctaaa
gcaaatgatgcagccggcgatggtacaactaccgctacagtacttgcacagtctattgtt
aatgaaggccttaaagcggttgctgcaggcatgaacccaatggaccttaaacgtggtatt
gataaagcaatcattgctgctgttgcagagcttaaggcgctttctgttccttgtgctgat
actaaagctattgctcaagtaggtactatttcagctaactctgataaagaaattggcgac
atcattgcagaagcaatggaaaaagtaggccgtaatacaggtgttattactgttgaagaa
ggtcaatcactagagaacgaactagatgttgtagaaggcatgcagtttgaccgtggttac
ctatctccttacttcattaacaacgctgaaaaaggcgcagttgaattagataacccattt
attctacttgtagataaaaaagtatctaacattcgtgagctactacctacattagaagcc
gttgctaaagcaagcaagccactattaatcattgctgaagaccttgaaggcgaagcactt
gcaacgcttgtagttaacaacatgcgcggcattgttaaggtatcagcggttaaagctcct
ggttttggcgaccgtcgtaaagcgatgttacaagatatcgccgtattaactggcggtact
gttatttctgaagaaattggccttgagcttgaaaaagcaacagttgaagacctaggtaca
gctaagcgcgttgttatcactaaagacgatacaactatcatcgatggtgctggcgaagaa
gaaggcattaccggtcgtgtttctcaaattaaagcacaaattgaagaagcaacatcagac
tacgataaagaaaaactacaagagcgtatggctaaacttgccggcggtgttgcagtaatt
aaagtaggcgcagcaactgaaattgaaatgaaagagaaaaaagaccgtgttgaagatgca
ttacatgcaactcgtgcagcggttgaagaaggtgtagtaccgggtggcggtgttgctcta
gtacgtgcagctagcaagctagttgaactacttggcgataacgaagatcaaaaccacggt
gttaaagttgcccttcgtgcgatggaagcacctcttcgtcaaatcgtaactaacgcgggt
gacgaagcatctgttgttattaacgctgttaaaggtggcgaaggtaactacggttacaac
gcagcaactggcgaatacaatgacatgattgaaatgggtatcctagatccaactaaagta
acgcgctctgcactacaatttgcagggtctatagcgggtctaatgatcacaactgaagca
atggttgctgaaatccctaaagaagaagctgctggtgcccctgatatgggtggcatgggc
ggaatgggtggcatgggcggcatgatgtaa
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