Pseudoalteromonas sp. PS1M3: PS1M3_33510
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Entry
PS1M3_33510 CDS
T11044
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psps Pseudoalteromonas sp. PS1M3
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psps03400
]
PS1M3_33510 (sbcD)
DNA repair and recombination proteins [BR:
psps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PS1M3_33510 (sbcD)
Archaeal homologous recombinant proteins
PS1M3_33510 (sbcD)
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Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
BBW93264
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Position
2:complement(57625..58872)
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AA seq
415 aa
AA seq
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MKVLHTSDWHLGQQFYEHDRRVEHQAFFTWLLATLVEQQIDLLLVAGDIYHTATPSASAE
NQLYQFIKDAKKHCPHMHVVIIAGNHDSANRILAAQPLLAQFDTHVVGRFDVSAPGDIII
EINTNNKRAVIVAMPFLRTSDISSLSHTKNGPSYAQGVEKAYKLALDHAYSINAQNSPLI
VMGHLHAKGGDISSDSERNLVIGGEESISASVFGNKADYVALGHLHKAQQVAKNETIRYS
GTPIPMSFSERNYTHQVNVIEFKSDKKQSISTTVNPLYIPRSADVIILPKGECVPLNDLC
EQIKALDTSQHAIAPYLRVKLKSSDTDTTFREQIEQALEGKHVKFCGIERVREQTAQTDN
DTVFEDLSEVEMLNPLNLLEQAFANDKDMAGQNVPDELKVLLNDVISELTEQEQL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtccttcatacctccgattggcaccttggccaacaattttacgaacacgaccgc
cgtgttgagcatcaagcattttttacctggttacttgccacacttgttgagcagcaaata
gatttgttattagtcgcaggcgatatttatcatacggcaacacccagtgccagcgccgaa
aaccaactttaccagtttataaaagacgctaaaaaacattgcccacacatgcacgtggta
attattgctggcaatcatgactctgcaaatcgtattttagcggctcaacccttacttgct
caatttgatacccacgtagtagggcgttttgatgtatcagcgcctggcgatattattata
gaaataaatactaataataaacgcgctgtaatcgtcgctatgccttttttacgtaccagc
gatataagctcacttagtcatactaaaaacggccctagttacgcacaaggcgttgaaaaa
gcctataagcttgcccttgatcacgcctatagcattaacgcgcaaaattcgccgttaatt
gtaatggggcacttacatgccaaaggcggtgatatttcaagtgactcagaacgtaattta
gtgattggtggggaggagtctatttcggccagtgtatttggtaacaaggcagactacgta
gcactggggcatttacacaaagcgcaacaagttgctaaaaacgagactattcgctacagc
ggcacgcctattcccatgtcgttttcagaacgtaactacacacaccaagttaatgttatc
gaatttaaaagcgataaaaaacagagcattagcacaactgtaaaccccctttacattccg
cgctcagccgacgttattattttaccaaaaggagagtgtgtgccactgaatgacttatgt
gaacaaattaaagcacttgatacatcacaacatgctattgccccttatttacgcgtaaag
cttaaatcaagtgataccgacaccaccttcagagaacaaatagaacaagcactagaaggt
aagcacgtaaaattttgcggtatcgaacgtgttcgtgaacaaacagcccaaaccgacaac
gacacagtatttgaagatttaagtgaagttgaaatgctcaatccgctcaatttattagaa
caagcctttgcaaatgataaagacatggcagggcagaacgtacccgatgaactaaaagtg
cttttaaacgatgtaataagtgagctgacggagcaagagcaactatga
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