Pseudoalteromonas sp. PS1M3: PS1M3_34990
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Entry
PS1M3_34990 CDS
T11044
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
psps Pseudoalteromonas sp. PS1M3
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psps03000
]
PS1M3_34990 (soxR)
Transcription factors [BR:
psps03000
]
Prokaryotic type
Helix-turn-helix
MerR family
PS1M3_34990 (soxR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
HTH_17
NinG
Motif
Other DBs
NCBI-ProteinID:
BBW93412
LinkDB
All DBs
Position
2:complement(230018..230479)
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AA seq
153 aa
AA seq
DB search
MSAEQKKLIDATLTVGYVAKRSGVKVSTLHFYETKHLIKSWRNSGNQRRYKPDVLRRVAV
IKAAQAMGISLDDIKQTLASLPDNRTPTKKDWSALSKRWQAQLDERIAYMQRIRDRVDGC
IGCGCLSLKSCPIYNKDDHLGSEQSGAVLLKSG
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgagcaaaaaaagctgatcgacgccactttaacagtaggttacgtagcaaaa
agaagtggtgtaaaagtgtctacattacacttttacgaaactaaacatttaataaaaagc
tggcgaaacagcggcaatcaacgccgctacaaacccgacgtacttcgccgagtggccgtt
ataaaagcagcacaagccatgggcatttcgctagacgatataaaacaaacacttgcctca
ctccccgataaccgcacgcccactaaaaaagattggtctgcgctttcaaaacgctggcaa
gctcaattagatgaacgcatagcgtatatgcaacgcatacgcgaccgcgtagatggatgt
attggctgtgggtgtttatcacttaaaagctgccctatttataataaagacgatcattta
gggagtgagcaaagtggagcagtgttgttaaaaagtggttaa
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