Pseudoalteromonas sp. PS1M3: PS1M3_36200
Help
Entry
PS1M3_36200 CDS
T11044
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
psps Pseudoalteromonas sp. PS1M3
Pathway
psps03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PS1M3_36200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psps03000
]
PS1M3_36200
03400 DNA repair and recombination proteins [BR:
psps03400
]
PS1M3_36200
Enzymes [BR:
psps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PS1M3_36200
Transcription factors [BR:
psps03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PS1M3_36200
DNA repair and recombination proteins [BR:
psps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PS1M3_36200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
BBW93533
LinkDB
All DBs
Position
2:369946..371301
Genome browser
AA seq
451 aa
AA seq
DB search
MISSYWQKARQSRDHRFDGLFYVAVKSTGIYCRPICPAPTALEKNVIYYEFAHNAAQDGF
RPCIRCRPDSAPGSAAWQGVKTTALRAKQLIDQYDEHDCEKLAERLGVSSRYLRCLFKQH
FGLSLTQYRLFKQCHFAKKLIQETHLSLTDIAYAAGFKSTRRFNDAFFKQLNMTPSALRQ
NTKIQSTSLTLTLPFRPPYNWLALRAFIEKRLIKPVEWISENSYGRTFSNTLYKGCFTAE
FIESKHHFKVKVEIDDTQYLQTVINNIRRVLDLDADINLIETHLNTNINNAFTLCNGLRL
PGIWSEFEAGIRAVLGQQVSVAAAHSLVTKLVDELGEKDVNHVYFPSAEQVAQSNFDFFK
MPQARKNALHNLALFCTNNPGNSDLDLWLDLKGIGPWTVNYAKLRGQSQPDILLDGDLGI
KKAQAAASSFNSEKCTPFRSYLTFQLWQQLS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatcttactggcaaaaagcacgtcaaagtcgcgatcaccgatttgatggtctt
ttttatgttgcggtaaaaagtacgggtatttactgcaggcctatttgtccagcgcctact
gcgcttgaaaaaaatgttatttattatgagtttgctcataatgcagcgcaagacggtttt
aggccttgcattcgttgtaggcctgacagtgcaccgggaagtgcggcttggcaaggggtc
aaaacaaccgctttgagggcaaagcagctcattgaccaatacgatgaacatgattgcgaa
aagttagctgaaaggttaggagtgagtagccgatatttaagatgtttgtttaaacaacat
tttggtttgtcgcttacgcaatatcgtttatttaagcaatgtcattttgcaaaaaagctg
atacaagaaacgcatttatcgctaaccgacattgcatacgcggcaggttttaaaagtaca
aggcgatttaatgatgcttttttcaaacaattaaatatgacaccatcagcactgcgtcaa
aataccaaaattcaaagtacgtcacttaccttaacccttccttttaggcctccttataat
tggcttgctttacgcgcatttatagaaaaacgtttaattaaacctgttgaatggatttcg
gaaaatagctacgggcgtacgttttcaaatacgctttataaaggatgtttcactgctgaa
tttatcgaaagtaaacatcactttaaagtaaaggtagagatagacgacacgcaatatttg
caaacagttataaataatatacgccgggttctagacttagatgctgatattaatttaata
gaaactcatttaaatacaaacataaacaatgcattcacactgtgtaacggacttaggttg
ccaggtatttggtcagagtttgaggctggtattagggctgtgctaggacaacaagtaagc
gtagccgcagcgcatagcttagtcactaaactagttgatgagctcggagaaaaagacgta
aaccatgtgtattttccgagtgccgaacaggtagcacaaagcaactttgatttttttaaa
atgccgcaagcgcgcaaaaatgcgctacataatttagccttgttttgcaccaataaccct
ggcaatagcgacttagatttatggcttgatttaaaaggaataggcccatggactgtgaac
tatgcaaaattaagagggcaaagccaacccgatatattacttgatggtgatttaggaatt
aaaaaagcacaagctgcggcaagttcgtttaacagtgaaaagtgcaccccatttcgttcc
tatttaacgtttcaactttggcagcaactatcatga
DBGET
integrated database retrieval system
