Pseudoalteromonas sp. PS1M3: PS1M3_37820
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Entry
PS1M3_37820 CDS
T11044
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psps Pseudoalteromonas sp. PS1M3
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psps03400
]
PS1M3_37820
Enzymes [BR:
psps01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PS1M3_37820
DNA repair and recombination proteins [BR:
psps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PS1M3_37820
Prokaryotic type
PS1M3_37820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
SepSecS
Motif
Other DBs
NCBI-ProteinID:
BBW93695
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All DBs
Position
2:555547..556941
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AA seq
464 aa
AA seq
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MNTLFWFRRDLRLFSNEALIEALNNGAKHAIFFVCEKQWQQHQAAPIQIDLLKRRVTYLQ
EQLANFGITLNVINAPSFSDCESELLSFCETHDIQHIIANTEYELNEVNRDKAVLAQCDK
RSITFTLYEGDLIAPVGSIKNQSNEMYKVFTPFKRAWLKQYQDTHFSLAQWPLEQNPIKI
EKSQHLESDCSSDKWPVDDETLLSVVDNFICDKLTSYDDQRDIPSIKGTSGLSPYLALGI
ISPKQLLINIQQRYPDILTTSKSKTFTWVNELIWREFYRHLIAEYPKLSRGENFNEKYNP
VEWRKSEKEFNAWCEGRTGYPLVDAAMLQLKQTGWMHNRLRMVVASFLTKHLLIDWREGE
RFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPITQSERFDPTGKFIRKYLPELE
NVPDKHIHFPHTYLAATGKGSECYWPAIVDHKAARERALAAFKV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattattttggtttaggcgcgatttgcgccttttttcgaatgaagcgttaata
gaagcgctaaataatggcgctaaacacgccattttttttgtttgcgaaaagcagtggcaa
caacaccaagcagcgccaatacaaattgatttactaaagcgacgtgtaacttatttgcaa
gagcaacttgccaatttcgggataacgcttaatgtaataaacgctcccagttttagtgat
tgtgaatctgagctactttcgttttgtgaaactcatgatattcagcatattattgctaat
acagaatatgagcttaacgaagtaaatcgagacaaagctgttttagcgcaatgtgacaaa
cgttccattacttttacattatacgaaggagatttaattgcgcctgttggtagcattaaa
aaccaaagtaatgaaatgtataaagtattcacaccatttaaacgcgcatggttaaaacag
tatcaagatactcactttagcttggcgcaatggccactagaacaaaaccctataaaaatt
gaaaaaagccagcaccttgaaagcgattgtagttcggataaatggcctgttgatgatgaa
acacttttgagtgtagttgataattttatttgcgataagttaacaagctacgacgatcag
cgtgatatccccagtattaaaggtacatcgggtttgagcccgtatttagcgctgggcatt
attagcccaaagcagttgctaattaatatacagcaacgttaccccgacattctgactaca
tcaaaaagtaaaacattcacgtgggttaacgagcttatttggcgagagttttacaggcat
cttattgcagagtacccgaagctctctcgtggtgaaaactttaacgagaaatacaatcct
gttgaatggcgaaaaagtgaaaaagaatttaacgcgtggtgcgaaggtcgaactggttac
ccactcgtagacgcagctatgttacagcttaagcaaactggatggatgcataaccgttta
agaatggtagtggccagttttttaactaaacacctattaattgactggcgtgaaggtgag
cgcttttttatgcagcaccttattgatggcgatttagcttctaacaatggtggctggcag
tgggctgcaagcacagggtgtgatgcacaaccgtattttaggattttcaaccctattact
caaagtgagcgctttgatccaacaggtaagtttatacgtaagtatttgcctgagcttgaa
aatgtgccagataaacacattcattttccgcatacttacttagctgcaacaggcaaggga
agtgaatgttactggccagcaattgttgaccacaaagctgcacgtgaacgtgcgctcgct
gcatttaaggtatga
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