KEGG   Pseudoalteromonas sp. PS1M3: PS1M3_37910
Entry
PS1M3_37910       CDS       T11044                                 
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
psps  Pseudoalteromonas sp. PS1M3
Brite
KEGG Orthology (KO) [BR:psps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psps03032]
    PS1M3_37910 (hupB)
   03036 Chromosome and associated proteins [BR:psps03036]
    PS1M3_37910 (hupB)
   03400 DNA repair and recombination proteins [BR:psps03400]
    PS1M3_37910 (hupB)
DNA replication proteins [BR:psps03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PS1M3_37910 (hupB)
Chromosome and associated proteins [BR:psps03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PS1M3_37910 (hupB)
DNA repair and recombination proteins [BR:psps03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PS1M3_37910 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 UBA_HYPK HU-DNA_bdg Arteri_nsp7a
Other DBs
NCBI-ProteinID: BBW93704
LinkDB
Position
2:563134..563409
AA seq 91 aa
MNKAQLVEKIATDAEISKAAATRALDAFTGAVTSALKEGDSVALVGFGTFSVKERAARTG
RNPQTGAEIQIAAATIPSFKAGKGLKDQVNL
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaataaagctcaattagttgaaaaaattgctactgacgcggaaatttctaaagccgct
gctacacgtgctcttgacgcgtttactggcgctgtaacttctgcacttaaagaaggtgat
tcagtagcattagttggttttggtactttctcagttaaagaacgtgctgcacgcacaggc
cgtaaccctcaaacgggtgctgagatccaaatcgcagcggcaactatcccaagctttaaa
gcaggtaaaggtcttaaagaccaagtaaacctataa

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