Pandoraea sputorum: NA29_01610
Help
Entry
NA29_01610 CDS
T03554
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pspu
Pandoraea sputorum
Pathway
pspu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NA29_01610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspu03400
]
NA29_01610
Enzymes [BR:
pspu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NA29_01610
DNA repair and recombination proteins [BR:
pspu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NA29_01610
Prokaryotic type
NA29_01610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJC15072
UniProt:
A0A239SVE2
LinkDB
All DBs
Position
5140992..5141864
Genome browser
AA seq
290 aa
AA seq
DB search
MASRSRTATAAHTDEARQASLFDEPNDTGRIARTAPARQDDSADSPVTVAGPLKGRIEDQ
FAALPDAWKTLIAPFVQSDAYVPLCQYVDAEVAAGKTVYPADIFHALRMTSPKDVKVVIL
GQDPYHGDDNGIAQAHGMAFSVQRGVRVPPSLRNIYKEIERDLGIAPPSHGNLDAWAKQG
VLLLNTTLTVEAANAASHAKPFKKGGWQACTDTLLCGLAEQQGPLVFLLWGSHAQAKTPL
LSGHGHLLLEAPHPSPLSAHRGFLGCGHFSAANTFLEKHGKTPIDWRVPA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacgctcacgcaccgcaaccgccgcgcacactgacgaggcgcgacaagcctcc
ctcttcgacgagccgaacgacacggggcgcatcgcgcgcactgcgcctgcacgtcaggat
gacagcgccgacagtcccgtcaccgtggcgggtccgttgaagggccgcatcgaagatcag
ttcgctgcgctgcccgacgcgtggaaaacgctcatcgcgccgttcgtacagagcgacgct
tacgtcccgctgtgccagtacgtcgacgctgaagtcgcggcaggcaagaccgtctacccg
gcggacattttccatgcgctgcgcatgacgtcgccgaaggacgtgaaagtcgtcatcctc
ggacaggacccgtatcacggcgacgacaacggcattgcgcaggcgcatggcatggcgttt
tcggtgcagcgcggcgtgcgcgtgccgccgtcgttgcgcaacatctacaaagagatcgaa
cgggatctgggcatcgcaccgccgtcgcatggcaacctcgacgcctgggcgaaacagggc
gtgctactcctgaacacgacgctcaccgtcgaagccgccaatgctgcgagccacgcgaag
ccgttcaagaagggcggatggcaagcctgcacggacaccttgctctgcggcctcgccgaa
cagcaaggcccgctggtgttcctgctttggggcagccacgcgcaggcaaaaacccccctg
ctcagcggtcacggccatctgctgctcgaagcgccgcacccttccccgctatcggcccat
cgcggcttcctcggctgcggtcacttcagcgccgccaacaccttccttgaaaagcacggc
aagacgcccatcgattggcgggtaccggcgtag
DBGET
integrated database retrieval system
