Pandoraea sputorum: NA29_01930
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Entry
NA29_01930 CDS
T03554
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pspu
Pandoraea sputorum
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspu03000
]
NA29_01930
Transcription factors [BR:
pspu03000
]
Prokaryotic type
Helix-turn-helix
Other families
NA29_01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
GAF
HTH_30
PAS_4
AAA_5
HTH_23
HTH_50
HTH_22
HTH_29
HTH_7
PAS_9
HTH_psq
HTH_20
HTH_28
HTH_1
HTH_17
RWP-RK
Diguanyl_cycl_sensor
AAA_16
HTH_Tnp_1
HTH_38
AAA
AAA_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AJC15113
UniProt:
A0A239SW25
LinkDB
All DBs
Position
complement(5211400..5213349)
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AA seq
649 aa
AA seq
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MPASTQAAHARRVLNVAQGHLPSGSVATDPNIASSWRRCLDTHALDPGARMAPRVLESSQ
LRERRSAMERLRNVSIPVLERLQRQLMNPRQAVLLTAPDGVIVDSRLHDGTRDDFHRAGL
WPGADWSESCEGTNGIGTCAVERAPVIICQQDHFRALHTPLTCTASPVFAPQGDLLAVID
VSSTSTDLTRQSQFHTLALVNLSAKVVESEYFFQHYRDEWLLQWQEQADHLGGFAQALLA
FDDAGHVLAANQSALNCLGVTRDALVGTRVDRWFVQTLDALLARAHPSPSACWPLHANTG
ANAGESLLAMLRAPARVLRRAPSVSRPAPEVVTQPFSDPTLARAFSKACRVFAHDVPVLI
RGETGSGKEVFARAVHAASARSGGPFVALNCAAIPESLIESELFGYVGGSFTGARKEGMA
GKLWQANGGTLFLDEIGDMPFAMQTRLLRVLEDRMVSPLGGGEPVPLDIRVLSATHRDLY
ARIDERLFREDLLYRLSGLEVTVPPLREREDKAEVIRRLFAQAESMGHGPAVHVTPAALD
RLCHHTWPGNVRQLRSVIRTLVALSENGVVTVDDLPDELREADIAMTDVSPSDSPADGLT
EAPLEAAERQALRAALDACQGQVSAAARRLGVSRNTLYRKLRRFGLLRG
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgccagccagtacgcaagccgcacacgcacgccgtgtgctgaacgtcgcgcagggccat
ttgccatcgggttcggtggcgaccgacccgaacatcgccagttcgtggcggcgctgtctc
gacacgcacgcgctcgacccgggcgcgcgcatggcgccgcgcgtgctcgaatcctcgcaa
ttgcgcgaacgccgcagcgcgatggaacgcctgcgcaacgtttccattccggtgctggaa
cgtctgcaacgtcagttgatgaacccgcgccaggccgtgttgctcacggccccggacggc
gtgatcgtcgactcgcgtctgcatgacggcacccgcgacgacttccatcgcgccgggctg
tggccgggcgcggactggagcgagtcttgcgaggggaccaacggcatcgggacgtgcgcc
gtcgagcgcgcgcccgtcatcatctgtcagcaggaccactttcgcgcactgcatacgccg
ctcacttgcacggcgagtccggtgttcgccccgcagggcgatctgctggcggtgatcgat
gtgtcgtctaccagtacggatctgacgcgtcagagtcagtttcatacgctggcgctcgtc
aacctgtcggcgaaggtcgtcgagagcgagtatttctttcagcactatcgcgacgaatgg
ctgctgcaatggcaggagcaggcggaccatctcggcggattcgcgcaggcgttgctcgcg
ttcgacgatgcggggcacgtgctcgccgccaatcaaagcgcattgaattgtcttggggtg
acgcgcgacgcgctggtgggcacgcgcgtcgatcgatggttcgtgcagacgctcgacgcc
ctgctcgcgcgggcgcatccgtcgccgagcgcctgctggccgctgcacgccaataccggt
gcgaacgccggtgagtcgttgctggcgatgctgcgcgcgccagcgcgcgtactccggcgt
gcgcccagtgtgtcgcgccctgcgccggaagttgtcacgcagccgttctccgaccccacg
ctggcgcgtgcgttctcaaaggcctgccgcgtcttcgcgcacgacgtgcccgtgctgatt
cgcggtgaaacgggcagtggtaaagaagtgttcgcacgcgcagtgcacgcggcgagcgca
cgttcgggcggaccgttcgtcgcactcaattgtgcggcgattcccgagtcgctgatcgaa
agcgagttgttcggctatgtcggcggcagcttcaccggtgcgcgcaaggaagggatggcg
ggcaagctgtggcaggcgaatggcggcacgttgtttctcgacgagatcggcgacatgccg
ttcgcgatgcaaacgcggttgctgcgggtgctggaggaccggatggtgtcgccgctgggc
ggtggagagccggtgccgctggacattcgcgtgctgagtgccacgcatcgcgatctctac
gcgcgtatcgacgaacgactgtttcgcgaggatctgctttatcgcctgagcgggctcgaa
gtcaccgtaccgccgcttcgcgagcgcgaggacaaggccgaggtgattcggcggctattc
gcgcaggcagaatcaatgggtcatggccccgccgtgcatgtgacgcccgctgcgctcgac
cggttgtgtcatcacacgtggccggggaatgtgcgtcagctgcgcagtgtcattcggacg
ctggtggcgctcagcgagaatggcgtcgtcaccgtcgacgatctgccggacgaactacgc
gaagcggacatcgcaatgacggatgtttcaccgtccgattcaccggccgacggattgacc
gaagcaccgctggaagcggcggagcggcaggcgctgcgtgcggcgctcgacgcatgtcag
ggccaggtgagcgccgcagcgcgacggctcggcgtgagccgcaacacgctgtatcgcaag
ctcaggcgcttcgggttgctgcgcgggtga
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