Pandoraea sputorum: NA29_02915
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Entry
NA29_02915 CDS
T03554
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pspu
Pandoraea sputorum
Pathway
pspu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NA29_02915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspu03021
]
NA29_02915
03400 DNA repair and recombination proteins [BR:
pspu03400
]
NA29_02915
Enzymes [BR:
pspu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NA29_02915
Transcription machinery [BR:
pspu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NA29_02915
DNA repair and recombination proteins [BR:
pspu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NA29_02915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
AJC15270
UniProt:
A0A239SX34
LinkDB
All DBs
Position
complement(5411614..5415825)
Genome browser
AA seq
1403 aa
AA seq
DB search
MKALLDLFKQVQQDEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVLEPGMTPLKRCQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRSIDIDAQVEHLRAELQATGSEAKIKKYAKRLKVLEAFQRSGIKPEWMVLE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPDIIVRNEKRMLQ
ESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPT
LKLHQCGLPKLMALELFKPFIFHKLEVMGVATTIKAAKKEVENQTAVVWDILEEVIREHP
IMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATRDKINGKGEGLSFIDVSEVLRAYDNK
EVELASRVNVRITEYLVDAETGEKTPKITLYPTTVGRAILSEILPPGLPFSVLNKSLKKK
EISKLINTAFRRCGLRETVIFVDKLMQSGFRLATRAGISICVDDMLVPTKKEELIGEASK
KVKEYDRQYMSGLVTAQERYNNVVDIWGATGDAVGKAMMEQLSKEKTTDRDGNVVDQESF
NSIYMMADSGARGSSAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEALRDRI
LGRVAVADVVNPETQETVFEAGTLLDEDVVEMIEALGVDEVRVRTPLTCDTRFGLCAACY
GRDLGRGTRVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSIEAKSNGTVR
FTATMRYVTNGRGEQIAISRSGEVLITDDHGRERERHKVPYGATLLQLDGAQVKAGAQLA
TWDPLTRPIITEHGGFAKFENVEEGVTVAKQIDDVTGLSTLVVIDPKRRGPASKNVRPQV
KLLDENGVEVKIPGTDHPVTIGFQVGALITIKDGQQVPVGEVLARIPTEAQKTRDITGGL
PRVAELFEARAPKDAGILAEVTGTTSFGKDTKGKQRLVITDLDGNQHEFLIPKEKQVLVH
DGQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIEVIVRQ
MLRRVQITDNGDTRFIIGEQVERSDMLYENDAMNAADKRPAQYENVLLGITKASLSTDSF
ISAASFQETTRVLTEAAIMGKKDDLRGLKENVIVGRLIPAGTGLAYHKARKARESSDRER
HDQIALEEAFAPIPTSVEEPTAE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctttgctcgatctattcaagcaagtccagcaggacgaacagttcgacgcgatc
aagatcggtctggcttcgccggacaagatccgctcgtggtcgttcggtgaagtgaagaag
ccggagacgatcaactaccggaccttcaagcccgagcgcgacggtctgttctgcgccaag
atcttcggtccgatcaaggactacgagtgcctttgcggcaagtacaagcgcctgaagcac
cgtggcgtgatctgcgagaagtgcggcgttgaagtgacgctggccaaggtgcgccgtgag
cgcatgggccacatcgaactggcttcgccggtcgcgcacatctggttcctgaagtcgctc
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgaacgcgtgctgtac
ttcgaagcgtacgtggttctcgagccgggcatgacgccgctcaagcgttgccagatcatg
accgaggaggattactacaacaaggtcgaggaatacggcgacgaattccgtgccgagatg
ggcgcggaaggcgtgcgcgagctgctgcgctcgatcgacatcgacgcacaggtcgagcat
ctgcgcgccgagctgcaagccacgggctcggaagccaagatcaagaagtacgccaagcgc
ctgaaggttctcgaggcattccagcgctcgggcatcaagcccgagtggatggtgctcgaa
gtcctgccggtgctcccgcccgagctgcgcccgctggtgccgctcgacggtggccgtttc
gcgacctcggacctgaacgatctgtatcgccgcgtcatcaaccgtaacaaccgtctgaag
cgtctgctcgagctcaaggccccggacatcatcgtgcgcaacgaaaagcgcatgctgcaa
gagtccgtggactcgctgctcgacaacggccgtcgcggtaaggcgatgaccggtgcgaac
aagcgcccgctcaagtcgctggccgacatgatcaagggtaagagcggtcgtttccgtcag
aacttgctgggtaagcgcgtcgactactcgggtcgttcggtgattaccgtgggcccgacg
ctcaagctgcatcagtgcggtctgccgaagctgatggcgctcgaactcttcaagcctttc
atcttccacaagctggaagtgatgggcgtggccacgaccatcaaggccgcgaagaaggaa
gtcgagaaccagacggcggtggtgtgggacatcctggaagaggtgatccgcgaacatccg
atcatgctgaaccgcgcaccgacgctgcaccgcctgggtattcaggcgttcgagccggtg
ctgatcgaaggcaaggcaattcagcttcacccgctggtttgcgcggcgttcaacgccgac
ttcgacggtgaccagatggctgttcacgtgccgctgtcgctcgaagcgcagatggaagcg
cgtaccctgatgctggcctcgaacaacgtgttgttcccggctaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctgggtctgtactacgcgacgcgcgacaagatcaacggc
aagggcgaaggcctgtcgttcatcgacgtgtccgaagtgctgcgtgcgtacgacaacaag
gaagtcgaactggcttcgcgcgtgaacgtgcgtattacggagtacctggtcgacgcagaa
acgggcgagaagacgccgaagatcacgctgtacccgacgaccgtcggccgcgcgatcctg
tcggaaattctgccgccgggcctgccgttctcggtgctgaacaagtcgctcaagaagaag
gaaatctcgaagctgatcaacacggcgttccgccgttgcggtctgcgcgagacggtgatc
ttcgtcgacaagctgatgcagtcgggcttccgcctggcaacgcgtgccggtatctcgatc
tgcgtcgacgacatgctcgtgccgacgaagaaggaagagctgatcggcgaagcgtcgaag
aaggtcaaggaatacgaccgtcagtacatgtcgggtctggtcacggcgcaagagcgttac
aacaacgtcgtggacatttggggtgctaccggtgacgccgtgggtaaggcgatgatggag
cagctctcgaaggaaaagaccaccgatcgcgatggcaacgtcgtggatcaggagtcgttc
aactcgatttacatgatggccgactccggtgctcgcggttcgagcgcccagattcgccag
ctcgccggtatgcgtggcctgatggccaagccggacggctcgattatcgagacgccgatt
accgcgaacttccgcgaaggcctgaacgtgttgcagtacttcatctcgacccacggtgca
cgtaagggtctggccgatacagcactgaagacggcaaactcgggttacctgacgcgtcgt
ctggtcgacgtgacgcaagatctggtcgtggttgaagacgattgcggcacgagcaacggc
gtggcgatgaaggcgctggtcgagggcggtgaagtggtcgaagccctgcgtgaccgtatc
ctgggtcgtgtggctgtggccgacgtcgtgaatccggaaacgcaagaaacggtgttcgaa
gctggcacgctgctggacgaagacgtcgtcgaaatgatcgaggcgctgggtgtcgacgaa
gtgcgcgtgcgcacgccgctgacctgcgatacgcgtttcggtctgtgcgcagcttgctat
ggtcgcgatctgggccgtggtacgcgtgtgaacgtcggcgaagcggtcggcgtgatcgca
gcacagtcgatcggtgaaccgggcacgcagctgacgatgcgtacgttccacatcggtggt
gctgcgtcgcgtgcggcagtggcctcgtcgatcgaagccaagtcgaacggtacggttcgc
ttcacggcaaccatgcgttacgtgacgaacggccgcggtgagcagattgcgatttcgcgt
tcgggtgaagtcctgatcacggacgatcacggtcgcgagcgcgagcgtcacaaggtgccg
tacggcgccacgctgctgcaactggacggcgcacaggtcaaggccggtgcccaactggct
acgtgggatccgctgacgcgcccgatcattaccgaacacggtggtttcgccaagttcgag
aacgtcgaggaaggtgtcacggttgccaagcagatcgacgatgtgacgggtctgtccacg
ctggtcgtgatcgatccgaagcgtcgtggtccggcgtcgaagaacgtgcgtccgcaggtc
aagctgctcgacgagaacggcgtggaagtgaagatcccgggtacggatcacccggtgacg
atcggcttccaggtcggcgcactgatcaccatcaaggatggtcagcaagtgccggtgggt
gaagtgctcgcacgtatcccgaccgaagcgcagaagacgcgtgacattaccgggggtctg
ccgcgcgtggccgaactgttcgaagcgcgtgcaccgaaggacgccggcattctggccgaa
gtcacgggtacgacgtcgttcggtaaggacacgaagggcaagcagcgtctggtcattacc
gatctggacggcaaccagcacgaattcctgattccgaaggaaaagcaggtgctggtgcac
gacggtcaggtggtgaacaagggcgaaatgatcgtggacggcccggccgacccgcacgac
atcctgcgtctgcagggtatcgaggcgctgtcgcgctacatcgtcgatgaagtgcaggac
gtgtaccgcttgcagggtgtgaagattaacgacaagcacatcgaggtgatcgttcgccag
atgctgcgtcgtgtgcagatcaccgacaacggcgatacgcgcttcatcatcggcgaacag
gtcgagcgttcggacatgctctacgagaacgacgccatgaacgccgcggacaagcgtccg
gcgcagtacgagaacgtgctgctgggtattacgaaggcgtcgctgtcgacggattcgttc
atctcggctgcatcgttccaggaaacgacgcgcgtgctgaccgaagccgccatcatgggc
aagaaggacgacctgcgtggcctgaaggaaaacgtcatcgttggccgtctgatcccggca
ggtacgggtctggcgtatcacaaggcccgcaaggcccgcgaatcgtcggatcgcgagcgt
cacgaccagatcgctctggaagaggcgtttgccccgatccccacttcggtggaagagccg
acggcagagtaa
DBGET
integrated database retrieval system
