Pandoraea sputorum: NA29_04270
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Entry
NA29_04270 CDS
T03554
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pspu
Pandoraea sputorum
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspu03016
]
NA29_04270
Enzymes [BR:
pspu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NA29_04270
Transfer RNA biogenesis [BR:
pspu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NA29_04270
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
APD12658
UniProt:
A0A239SZ92
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All DBs
Position
complement(5734660..5735268)
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AA seq
202 aa
AA seq
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MRLFLALWPGPGVRAQLHEWAVSAHSECGGRVLRAQTLHLTLAFLDEVDPARLPVLLALM
QRTPLEPFTLTFDHLGYWSDRKIVWAGAPGVPDQLVATRNTLLSQWRATGARVVTQSFRP
HVSLLRHARRAPSDLHPPPLIWHCDGYVLVHSVRTPRGPHYRLLAEHHSGESGGQRGGQP
DVFFETSAEKSAMPATQYGIVG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcttccttgcgctttggccggggcccggcgtgcgtgcgcagcttcacgagtgg
gccgtgtcggcgcattcggaatgcggcggacgcgtgctccgcgcccagaccttacatctg
acgctcgccttcctcgacgaagtcgatcccgctcgtctgcccgtgttgctcgcgctcatg
cagcgcacgccgctcgaaccgttcacgctgacgttcgatcatctgggctattggtcggac
aggaagatcgtgtgggcgggtgcgccgggcgtgcctgaccaactcgttgccacccgcaac
acgctgctgtctcaatggcgcgccaccggtgcgcgcgtcgtgacgcagtccttccgtccc
cacgtgtcgctgctgcgtcacgcgcgacgcgcgccttcggatctccatccacctccgctg
atctggcattgcgacggctacgtcctcgtgcattcggtacgcacaccgcgcgggccgcac
tatcgcttgctggccgagcaccatagcggagagtccggcggacagcgcggcgggcaaccc
gacgtctttttcgagacgtccgccgagaaatcggcaatgcccgcaacgcaatacggtata
gtcggatga
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