Pandoraea sputorum: NA29_04390
Help
Entry
NA29_04390 CDS
T03554
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
pspu
Pandoraea sputorum
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspu03000
]
NA29_04390
Transcription factors [BR:
pspu03000
]
Prokaryotic type
Helix-turn-helix
Other families
NA29_04390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
PAS_8
AAA
Mg_chelatase
PAS_4
PAS_7
AAA_2
AAA_3
AAA_16
PAS_9
HTH_29
HTH_23
PAS
Xre-like-HTH
ATPase
bpMoxR
AAA_7
DUF815
Motif
Other DBs
NCBI-ProteinID:
AJC15481
UniProt:
A0A239S5Y2
LinkDB
All DBs
Position
complement(19514..21505)
Genome browser
AA seq
663 aa
AA seq
DB search
MPPSHSGAPAPLDPRSRRPGIALVSISRLQTLCETVAPRYTDRARFYSVREGYGAAVTAL
QSYVESGAVDVVLAAGSNGAYLRENLSVPVVTVKVNGFDVLSAITRATTTWPDQPLGLVL
HETVSRELDDLGQLLKIQIRQRAYRSVDEVQDAVDTLAAQGCKVIIGPGMACDFAQEAGL
EHVFLYSLGAVEEAFERSVELARVSREKESKRMRLNTIVAHMRDGVAAFDDNGQLEAVNP
AMFTLLGIDAERVATHGARQFELTRKLGPLLRELSDDGVAVEERLAHIDGRTFITSCVPI
YEHGMRSGAVVTVQDAQMAQRIDRSLRTTQRPKHLVAKHELAELVGDSPQIEKVRRLARA
GAAHDATVLLTGESGTGKELVAQGIHNASARRGNPFVAFNCAALPEGLIESELFGHDEGA
FTGARRGGKAGLFEIAHTGTIFLDEIGEMPAAMQSRLLRVLQEREVMRLGSGRPVPVDVR
VIAATHRDLNALVAEGRFRADLYFRLNLLQVTLPALRERRDDIRLLAQTLLARNAAHYGL
DARASKPILDVLAPLFDRYDWPGNVRELENLLARAAIYLDTDVARHAQTLHEVFPELARL
GTQKRGGDKQLLASTSPDVTAREAVTRDAALAALQAAGGNRAAAARALGIGRTTFWRLMK
SGE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgccccccagccattccggcgcgcccgcgccgctcgatccgcgctcccgtcgcccgggc
atcgcgctcgtgagcatcagccgcttgcagacgctttgcgagacggtcgccccgcgttac
accgaccgcgcacgcttttactccgtacgtgaaggctatggcgcagcggtcacggcgttg
cagtcgtatgtcgagtcgggcgcggtcgacgtggtgctcgctgccgggtcgaacggcgcg
tatctgcgcgagaacctttcggtgccggtcgtgacagtcaaggtcaacggcttcgacgtg
ctcagcgccatcacgcgtgcgacgacgacctggcccgaccagccgctcggcctcgtgctg
cacgaaaccgtctcgcgcgaactggatgacctcgggcagttgctcaagatccagatccgt
cagcgtgcgtatcgctccgtcgacgaggtgcaagacgccgtcgacacgctggccgcgcag
ggctgcaaggtcatcatcggccccggtatggcgtgcgactttgcgcaggaggccgggctc
gagcacgtcttcctctattcgctcggcgcggtggaagaagccttcgagcgctcggtggaa
ctcgcccgcgtgagccgcgagaaagaatcgaaacgcatgcgtctgaacaccatcgtggcg
cacatgcgcgacggcgtcgcggcgttcgacgacaacggtcagctcgaagcggtgaatccg
gcgatgttcacgctgctgggtatcgacgccgagcgggttgccacgcacggcgcgcgccag
ttcgaactcactcgcaagcttggaccgttgctgcgcgaattgtcggacgatggcgtcgcc
gtcgaggagcggctggcgcatatcgacgggcgtacgttcatcacgagttgcgtgccgatc
tacgagcacggcatgcgctcgggggcagtggtcaccgtgcaggacgcacagatggcgcag
cgcatcgaccggtcgcttcgcacgacgcagcgcccgaagcatctcgtggcgaagcatgag
cttgccgaactggtcggcgactcgccgcagatcgagaaggtgcgacggctcgcccgcgcg
ggggccgcgcacgacgcgacggtgctgctaacgggcgagagcggtaccggcaaggaactg
gtggcgcagggcattcataacgcgagcgcgcgacgcggcaatccgttcgtcgccttcaac
tgtgcggcgttgccggaggggctgatcgagagcgagttgttcgggcacgacgagggggcg
ttcacgggggcgcgccgcggcggcaaggccgggctgttcgagatcgcgcacacggggacc
atctttctcgacgagattggcgagatgccagcggcgatgcaaagccgcctgctgcgcgtg
ttgcaggagcgcgaggtgatgcggctggggtcggggcgtccggtgccggtagacgtgcgc
gtgatcgccgccacgcatcgcgatctcaacgcgctggtcgccgagggacgtttccgtgcc
gatctctacttccgtctgaatcttctgcaagtgacgctgccagcgctgcgagagcgtcgc
gacgacattcgtctgctcgcgcagacattgctcgcgcgaaacgctgcgcattacgggttg
gacgcccgggcatcgaaacccattctcgacgtgctcgcaccgctgttcgatcgctatgac
tggccgggcaacgtgcgcgaactggagaatctgttggcccgcgcggccatctatctcgat
accgacgtcgcgcgtcatgcgcagacgcttcacgaggtgtttccggagttggcgcgactc
ggcacgcagaagcgcggaggcgataagcaattgctggcgtcgacatcgccggacgtcacc
gcacgtgaggccgtcacgcgcgacgccgcacttgccgccctgcaagccgctggcggcaac
cgcgccgccgccgcccgcgcgctgggcatcggtcgcacgacgttctggcgattgatgaaa
tccggcgaatga
DBGET
integrated database retrieval system
