KEGG   Pandoraea sputorum: NA29_04580
Entry
NA29_04580        CDS       T03554                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pspu  Pandoraea sputorum
Pathway
pspu02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pspu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NA29_04580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pspu03021]
    NA29_04580
Transcription machinery [BR:pspu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NA29_04580
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_24 Sigma70_ECF HTH_23 HTH_40 LacI GerE HTH_10 Xre-like-HTH Trp_repressor HTH_Crp_2 RepL
Other DBs
NCBI-ProteinID: AJC18562
LinkDB
Position
complement(59154..59684)
AA seq 176 aa
MRDDNGGRKDHARADASGVASLYYDHHGWLRNWLHRKLGNHGDAADLAHDTFVRLLSKDT
PVCPREPRAFLTVVAQGLVANLHRHRKIEAAYLDALAAQPEAVAPDPETRAILLQTLIDI
DRRLDGLPPVVRRVFLMSQLDGLAQRDIAETVGISIATVQRHIVKALHACCFGDAA
NT seq 531 nt   +upstreamnt  +downstreamnt
atgcgtgacgacaacgggggacgcaaagatcacgcacgcgcggacgcgtccggcgtggct
tcgctctattacgatcatcacggctggctacgcaactggctgcatcgcaaactcggcaat
cacggcgacgccgccgacctcgcgcacgacactttcgtgcgcctgctcagcaaggacacc
cccgtctgcccgcgagaaccccgcgcctttctcaccgtcgtggcgcaagggctcgtcgcc
aatctgcatcgccatcgcaagatcgaagccgcttatctcgacgcgctcgccgcacagccc
gaagccgtcgcgcccgatcccgagacccgcgccatcctgctccagacactcatcgacatc
gatcgtcgcctcgacggcctgccgcctgtcgtgcgccgcgtcttcctcatgtcgcaactc
gacggcctcgcacagcgcgacatcgccgagacggtcggcatctccatcgccaccgtgcaa
cgccatatcgtcaaagccctgcacgcctgctgcttcggagatgccgcatga

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